RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 EBLN2Q6P2I7 272 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
COL18A1-206ENST00000459895 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 OR8A1Q8NGG7 326 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 STOML3Q8TAV4 291 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 HYLS1Q96M11 299 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 OVOL2Q9BRP0 275 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 CSTL1Q9H114 145 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 SLC35B3Q9H1N7 401 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 UBE2CO00762 179 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 TPT1P13693 172 aaKnown RBP9.37□□□□□ -0.91
COL18A1-206ENST00000459895 NKX2-5P52952 324 aaPredicted RBP9.37□□□□□ -0.91
COL18A1-206ENST00000459895 AKR1C8PQ5T2L2 129 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 AMTNQ6UX39 209 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 Q6ZWC4 215 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 CLEC5AQ9NY25 188 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 PLA2G2EQ9NZK7 142 aa9.37□□□□□ -0.91
COL18A1-206ENST00000459895 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 PSG9Q00887 426 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 ICAM4Q14773 271 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 TMED6Q8WW62 240 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 RNF183Q96D59 192 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
COL18A1-206ENST00000459895 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
COL18A1-206ENST00000459895 Q9H3A6 140 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 TP53TG1Q9Y2A0 90 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 NBEAL2Q6ZNJ1 2754 aa9.36□□□□□ -0.91
COL18A1-206ENST00000459895 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
COL18A1-206ENST00000459895 BOLA2-SMG1P6H3BVE0 249 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 SPRY2O43597 315 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
COL18A1-206ENST00000459895 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
COL18A1-206ENST00000459895 SEC11BP0C7V7 166 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 GCHFRP30047 84 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 FHITP49789 147 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 BAP18Q8IXM2 172 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
COL18A1-206ENST00000459895 MAP1LC3B2A6NCE7 125 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 M0R2Z0 102 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
COL18A1-206ENST00000459895 EIF5AP63241 154 aaKnown RBP9.34□□□□□ -0.91
COL18A1-206ENST00000459895 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 IQCF2Q8IXL9 164 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 CSNK1G2-AS1Q8NCQ2 148 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 FAM213BQ8TBF2 198 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 MAP1LC3BQ9GZQ8 125 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 PRELID1Q9Y255 219 aa9.34□□□□□ -0.91
COL18A1-206ENST00000459895 GGTLC3B5MD39 225 aa9.33□□□□□ -0.92
COL18A1-206ENST00000459895 CXorf1O96002 111 aa9.33□□□□□ -0.92
COL18A1-206ENST00000459895 NUTF2P61970 127 aaKnown RBP9.33□□□□□ -0.92
COL18A1-206ENST00000459895 RANP62826 216 aaKnown RBP9.33□□□□□ -0.92
COL18A1-206ENST00000459895 OR10J6PQ8NGY7 276 aa9.33□□□□□ -0.92
COL18A1-206ENST00000459895 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
COL18A1-206ENST00000459895 RBMY1A1P0DJD3 496 aaKnown RBP9.32□□□□□ -0.92
COL18A1-206ENST00000459895 RBMY1CP0DJD4 496 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 ERCC8Q13216 396 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 RBMY1FQ15415 496 aaKnown RBP9.32□□□□□ -0.92
COL18A1-206ENST00000459895 SLC51BQ86UW2 128 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 Q8TAT8 98 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 SUN5Q8TC36 379 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 C1QTNF4Q9BXJ3 329 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 OTORQ9NRC9 128 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 RPH3ALQ9UNE2 315 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 X6R8D5 127 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 STARD9Q9P2P6 4700 aa9.32□□□□□ -0.92
COL18A1-206ENST00000459895 TRAV12-2A0A075B6T6 113 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 A0A1B0GV50 99 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 UMAD1C9J7I0 102 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 CRXO43186 299 aaPredicted RBP9.31□□□□□ -0.92
COL18A1-206ENST00000459895 INSP01308 110 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 GNG5P63218 68 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 FAM74A1Q5RGS3 127 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 LYPD1Q8N2G4 141 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 Q8NAQ8 132 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 OR11H2Q8NH07 326 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 TMEM167BQ9NRX6 74 aa9.31□□□□□ -0.92
COL18A1-206ENST00000459895 YTHDF2Q9Y5A9 579 aaKnown RBP9.31□□□□□ -0.92
COL18A1-206ENST00000459895 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 ZNF705EA8MWA4 302 aaPredicted RBP9.3□□□□□ -0.92
COL18A1-206ENST00000459895 CT45A10P0DMU9 189 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 UBE2G2P60604 165 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 KIR3DS1Q14943 382 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
COL18A1-206ENST00000459895 IGF2BP2-AS1Q96M15 143 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 ODF3Q96PU9 254 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 RARRES2Q99969 163 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 VGLL1Q99990 258 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
COL18A1-206ENST00000459895 IGHV3OR16-12A0A075B7B8 117 aa9.29□□□□□ -0.92
COL18A1-206ENST00000459895 IGHV4-28A0A0C4DH34 117 aa9.29□□□□□ -0.92
COL18A1-206ENST00000459895 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
COL18A1-206ENST00000459895 J3KRW8 73 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms