RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SPP1P10451 314 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 PDE6HQ13956 83 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 EBLN2Q6P2I7 272 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 RNF183Q96D59 192 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 RETNQ9HD89 108 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 CLEC5AQ9NY25 188 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 KANTRA0A1W2PQU2 76 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 BCL2L11O43521 198 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 OR7C2O60412 319 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 OR10J4P0C629 311 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF705DP0CH99 300 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF705BP0CI00 300 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-206ENST00000457035 TAS2R45P59539 299 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 DEFB135Q30KP9 77 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 KHDC3LQ587J8 217 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 FAM122CQ6P4D5 195 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 MORN3Q6PF18 240 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-206ENST00000457035 PQLC2Q6ZP29 291 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 CSNK1G2-AS1Q8NCQ2 148 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF738Q8NE65 137 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 BLNKQ8WV28 456 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 RAB24Q969Q5 203 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
ATG4A-206ENST00000457035 HYLS1Q96M11 299 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 TP53TG1Q9Y2A0 90 aa7.34□□□□□ -1.23
ATG4A-206ENST00000457035 PRAC2D3DTV9 90 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 HMGB3O15347 200 aaKnown RBP7.33□□□□□ -1.24
ATG4A-206ENST00000457035 SPRY2O43597 315 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 CA1P00915 261 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-206ENST00000457035 IGKV3-20P01619 116 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 STAG3L2P0CL84 134 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 STAG3L3P0CL85 134 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 PRB4P10163 310 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-206ENST00000457035 C4BPBP20851 252 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 CDC34P49427 236 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-206ENST00000457035 CNN1P51911 297 aaKnown RBP7.33□□□□□ -1.24
ATG4A-206ENST00000457035 PSG9Q00887 426 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 TMEM41BQ5BJD5 291 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 AMTNQ6UX39 209 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 EXOC3-AS1Q8N2X6 119 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 OR4B1Q8NGF8 309 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 OR8A1Q8NGG7 326 aa7.33□□□□□ -1.24
ATG4A-206ENST00000457035 ZNF471Q9BX82 626 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-206ENST00000457035 M0R3E3 92 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
ATG4A-206ENST00000457035 SEC11BP0C7V7 166 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 NUTF2P61970 127 aaKnown RBP7.32□□□□□ -1.24
ATG4A-206ENST00000457035 ZNF726P1Q15940 193 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 SSX7Q7RTT5 188 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 BAP18Q8IXM2 172 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 LYPD1Q8N2G4 141 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 SUN5Q8TC36 379 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 MRPL53Q96EL3 112 aaKnown RBP7.32□□□□□ -1.24
ATG4A-206ENST00000457035 PHYHIPLQ96FC7 376 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 ACTR3CQ9C0K3 210 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-206ENST00000457035 SLC35B3Q9H1N7 401 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 PRELID1Q9Y255 219 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 CSMD3Q7Z407 3707 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 RYR3Q15413 4870 aa7.32□□□□□ -1.24
ATG4A-206ENST00000457035 PFDN1O60925 122 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 ARL14EPLP0DKL9 152 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 FXYD7P58549 80 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 RANP62826 216 aaKnown RBP7.31□□□□□ -1.24
ATG4A-206ENST00000457035 UBE2L3P68036 154 aaKnown RBP7.31□□□□□ -1.24
ATG4A-206ENST00000457035 ICAM4Q14773 271 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 AKR1C8PQ5T2L2 129 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 STOML3Q8TAV4 291 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 EDA2RQ9HAV5 297 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 XCL2Q9UBD3 114 aa7.31□□□□□ -1.24
ATG4A-206ENST00000457035 CTXND1A0A1B0GTU2 59 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 CXorf1O96002 111 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 GCHFRP30047 84 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 EIF5AP63241 154 aaKnown RBP7.3□□□□□ -1.24
ATG4A-206ENST00000457035 HIST1H1AQ02539 215 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-206ENST00000457035 ZFP69Q49AA0 526 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 C9orf62Q8N4C0 152 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 OR11H2Q8NH07 326 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 RARRES2Q99969 163 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 C1QTNF4Q9BXJ3 329 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 Q9H3A6 140 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 AAMDCQ9H7C9 122 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 STARD9Q9P2P6 4700 aa7.3□□□□□ -1.24
ATG4A-206ENST00000457035 PGPA6NDG6 321 aa7.29□□□□□ -1.24
ATG4A-206ENST00000457035 ZNF705EA8MWA4 302 aaPredicted RBP7.29□□□□□ -1.24
ATG4A-206ENST00000457035 CRXO43186 299 aaPredicted RBP7.29□□□□□ -1.24
ATG4A-206ENST00000457035 CT45A10P0DMU9 189 aa7.29□□□□□ -1.24
ATG4A-206ENST00000457035 TPT1P13693 172 aaKnown RBP7.29□□□□□ -1.24
ATG4A-206ENST00000457035 FHITP49789 147 aa7.29□□□□□ -1.24
ATG4A-206ENST00000457035 ZNF705AQ6ZN79 300 aaPredicted RBP7.29□□□□□ -1.24
ATG4A-206ENST00000457035 SLC51BQ86UW2 128 aa7.29□□□□□ -1.24
ATG4A-206ENST00000457035 OR10J6PQ8NGY7 276 aa7.29□□□□□ -1.24
ATG4A-206ENST00000457035 AGPAT4-IT1Q9H0P7 198 aa7.29□□□□□ -1.24
ATG4A-206ENST00000457035 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
ATG4A-206ENST00000457035 UMAD1C9J7I0 102 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 NPIPB6E9PJ23 425 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 M0R2Z0 102 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 ERCC8Q13216 396 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 SPINK13Q1W4C9 94 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 C9orf47Q6ZRZ4 202 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 C1orf158Q8N1D5 194 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms