RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 HIST2H2BEQ16778 126 aa11.76□□□□□ -0.53
HIPK3-203ENST00000456517 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.76□□□□□ -0.53
HIPK3-203ENST00000456517 HIST1H2BHQ93079 126 aa11.76□□□□□ -0.53
HIPK3-203ENST00000456517 HIST1H2BNQ99877 126 aa11.76□□□□□ -0.53
HIPK3-203ENST00000456517 HIST1H2BMQ99879 126 aa11.76□□□□□ -0.53
HIPK3-203ENST00000456517 SHANK1Q9Y566 2161 aa11.75□□□□□ -0.53
HIPK3-203ENST00000456517 DYSFO75923 2080 aa11.75□□□□□ -0.53
HIPK3-203ENST00000456517 KLK9Q9UKQ9 250 aa11.75□□□□□ -0.53
HIPK3-203ENST00000456517 RBMY1FQ15415 496 aaKnown RBP11.75□□□□□ -0.53
HIPK3-203ENST00000456517 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
HIPK3-203ENST00000456517 GAS1P54826 345 aa11.75□□□□□ -0.53
HIPK3-203ENST00000456517 OCIAD2Q56VL3 154 aa11.75□□□□□ -0.53
HIPK3-203ENST00000456517 AMN1Q8IY45 258 aa11.75□□□□□ -0.53
HIPK3-203ENST00000456517 PNRC2Q9NPJ4 139 aaKnown RBP11.75□□□□□ -0.53
HIPK3-203ENST00000456517 RNASE2P10153 161 aaKnown RBP11.74□□□□□ -0.53
HIPK3-203ENST00000456517 PAX9P55771 341 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 PMVKQ15126 192 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 C5orf24Q7Z6I8 188 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 PFN2P35080 140 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 TMEM14EPQ6UXP3 125 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 GFI1Q99684 422 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 IGHV2-70DA0A0C4DH43 119 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 RPP25LQ8N5L8 163 aaKnown RBP11.74□□□□□ -0.53
HIPK3-203ENST00000456517 MLANAQ16655 118 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 VWC2Q2TAL6 325 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 J3QLI3 93 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 B3GALT5-AS1P59052 145 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 HGFACQ04756 655 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 PDE6HQ13956 83 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 NMSQ5H8A3 153 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 LINC01551Q86U37 167 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 SIGMAR1Q99720 223 aa11.74□□□□□ -0.53
HIPK3-203ENST00000456517 GAGE2BQ13066 116 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 GBF1Q92538 1859 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 G3V318 75 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 LHFPL1Q86WI0 220 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 TNFRSF6BO95407 300 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 CRIPAKQ8N1N5 446 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 SHANK2-AS3Q9BTD1 123 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 A0A1W2PPI3 338 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
HIPK3-203ENST00000456517 CLPSP04118 112 aa11.72□□□□□ -0.53
HIPK3-203ENST00000456517 ZNRD1Q9P1U0 126 aa11.72□□□□□ -0.53
HIPK3-203ENST00000456517 NAA38Q9BRA0 125 aaKnown RBP11.72□□□□□ -0.53
HIPK3-203ENST00000456517 TRBV6-6A0A0A6YYG2 114 aa11.72□□□□□ -0.53
HIPK3-203ENST00000456517 GAGE2AQ6NT46 116 aa11.72□□□□□ -0.53
HIPK3-203ENST00000456517 CREBBPQ92793 2442 aa11.72□□□□□ -0.53
HIPK3-203ENST00000456517 KLF5Q13887 457 aaPredicted RBP11.72□□□□□ -0.53
HIPK3-203ENST00000456517 TMEM242Q9NWH2 141 aa11.72□□□□□ -0.53
HIPK3-203ENST00000456517 NDUFB8O95169 186 aa11.72□□□□□ -0.53
HIPK3-203ENST00000456517 GAGE6Q13070 117 aa11.71□□□□□ -0.53
HIPK3-203ENST00000456517 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.53
HIPK3-203ENST00000456517 hDV102S1A0JD36 115 aa11.71□□□□□ -0.53
HIPK3-203ENST00000456517 TMEM243Q9BU79 118 aa11.71□□□□□ -0.53
HIPK3-203ENST00000456517 PTPRDP23468 1912 aa11.71□□□□□ -0.53
HIPK3-203ENST00000456517 CFHR2P36980 270 aa11.71□□□□□ -0.53
HIPK3-203ENST00000456517 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.53
HIPK3-203ENST00000456517 C15orf62A8K5M9 175 aa11.71□□□□□ -0.54
HIPK3-203ENST00000456517 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.54
HIPK3-203ENST00000456517 IGF2BP2-AS1Q96M15 143 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 A0A096LPF7 62 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 C22orf46C9J442 243 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 ZNRF2Q8NHG8 242 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 ZFAND6Q6FIF0 208 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 REG4Q9BYZ8 158 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 A0A0G2JMZ2 1700 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 LRRC37A2A6NM11 1700 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
HIPK3-203ENST00000456517 Q86TA4 180 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 KLHDC3Q9BQ90 382 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 I3L3M4 83 aa11.7□□□□□ -0.54
HIPK3-203ENST00000456517 HIST1H2BLQ99880 126 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 IGHV1OR15-1A0A075B7D0 117 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 ANGP03950 147 aaKnown RBP11.69□□□□□ -0.54
HIPK3-203ENST00000456517 FGF16O43320 207 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 TRBV24-1A0A075B6N3 115 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 MMP23AO75900 390 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 CDKN1BP46527 198 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 NXPH4O95158 308 aa11.69□□□□□ -0.54
HIPK3-203ENST00000456517 A0A087X0K7 114 aa11.68□□□□□ -0.54
HIPK3-203ENST00000456517 FNDC10F2Z333 226 aa11.68□□□□□ -0.54
HIPK3-203ENST00000456517 CXCL1P09341 107 aa11.68□□□□□ -0.54
HIPK3-203ENST00000456517 DKK4Q9UBT3 224 aa11.68□□□□□ -0.54
HIPK3-203ENST00000456517 IGHV3-38A0A0C4DH36 116 aa11.68□□□□□ -0.54
HIPK3-203ENST00000456517 MRPL52Q86TS9 123 aaKnown RBP11.68□□□□□ -0.54
HIPK3-203ENST00000456517 H3BMM0 161 aa11.68□□□□□ -0.54
HIPK3-203ENST00000456517 UBE2BP63146 152 aa11.68□□□□□ -0.54
HIPK3-203ENST00000456517 TAL2Q16559 108 aa11.67□□□□□ -0.54
HIPK3-203ENST00000456517 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
HIPK3-203ENST00000456517 LY96Q9Y6Y9 160 aa11.67□□□□□ -0.54
HIPK3-203ENST00000456517 GPR179Q6PRD1 2367 aa11.67□□□□□ -0.54
HIPK3-203ENST00000456517 PFN1P07737 140 aaKnown RBP11.67□□□□□ -0.54
HIPK3-203ENST00000456517 LINC00479Q96M42 142 aa11.67□□□□□ -0.54
HIPK3-203ENST00000456517 NDUFA4O00483 81 aa11.67□□□□□ -0.54
HIPK3-203ENST00000456517 YPEL3P61236 119 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms