RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 LINC00854A0A1B0GVQ3 168 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 A0A1W2PPQ1 181 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 H3BQ15 152 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 COX7A2P2O60397 106 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 TSC22D2O75157 780 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 NDUFB6O95139 128 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 CT45A10P0DMU9 189 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 IGLC2P0DOY2 106 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 BTF3P20290 206 aaKnown RBP11.55□□□□□ -0.56
TVP23A-202ENST00000456096 TAS2R30P59541 319 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 OPCMLQ14982 345 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 IAH1Q2TAA2 248 aaPredicted RBP11.55□□□□□ -0.56
TVP23A-202ENST00000456096 MGST2Q99735 147 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
TVP23A-202ENST00000456096 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
TVP23A-202ENST00000456096 FAT1Q14517 4588 aa11.54□□□□□ -0.56
TVP23A-202ENST00000456096 H3BNG1 76 aa11.54□□□□□ -0.56
TVP23A-202ENST00000456096 C10orf113Q5VZT2 155 aa11.54□□□□□ -0.56
TVP23A-202ENST00000456096 Q6ZTI0 123 aa11.54□□□□□ -0.56
TVP23A-202ENST00000456096 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
TVP23A-202ENST00000456096 SAT2Q96F10 170 aaPredicted RBP11.54□□□□□ -0.56
TVP23A-202ENST00000456096 GSKIPQ9P0R6 139 aa11.54□□□□□ -0.56
TVP23A-202ENST00000456096 PXMP4Q9Y6I8 212 aa11.54□□□□□ -0.56
TVP23A-202ENST00000456096 C7orf66A4D0T2 115 aa11.53□□□□□ -0.56
TVP23A-202ENST00000456096 LEPP41159 167 aa11.53□□□□□ -0.56
TVP23A-202ENST00000456096 DAZ2Q13117 558 aaKnown RBP11.53□□□□□ -0.56
TVP23A-202ENST00000456096 C4orf46Q504U0 113 aa11.53□□□□□ -0.56
TVP23A-202ENST00000456096 GGACTQ9BVM4 153 aa11.53□□□□□ -0.56
TVP23A-202ENST00000456096 SRRQ9GZT4 340 aa11.53□□□□□ -0.56
TVP23A-202ENST00000456096 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 NAP1L6A6NFF2 107 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 INPP1P49441 399 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 BAK1Q16611 211 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 VSIG2Q96IQ7 327 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 PYGO2Q9BRQ0 406 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.57
TVP23A-202ENST00000456096 A0A096LPF7 62 aa11.51□□□□□ -0.57
TVP23A-202ENST00000456096 NPIPB6E9PJ23 425 aa11.51□□□□□ -0.57
TVP23A-202ENST00000456096 MBPP02686 304 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-202ENST00000456096 LINC00315P59091 139 aa11.51□□□□□ -0.57
TVP23A-202ENST00000456096 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
TVP23A-202ENST00000456096 TRIQKQ629K1 86 aa11.51□□□□□ -0.57
TVP23A-202ENST00000456096 VPS13BQ7Z7G8 4022 aa11.5□□□□□ -0.57
TVP23A-202ENST00000456096 CAMLGP49069 296 aa11.5□□□□□ -0.57
TVP23A-202ENST00000456096 Q6ZRG5 221 aa11.5□□□□□ -0.57
TVP23A-202ENST00000456096 GSN-AS1Q9NRJ2 163 aa11.5□□□□□ -0.57
TVP23A-202ENST00000456096 TRGV2A0A075B6R0 118 aa11.49□□□□□ -0.57
TVP23A-202ENST00000456096 CCDC160A6NGH7 325 aa11.49□□□□□ -0.57
TVP23A-202ENST00000456096 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
TVP23A-202ENST00000456096 GUK1Q16774 197 aa11.49□□□□□ -0.57
TVP23A-202ENST00000456096 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
TVP23A-202ENST00000456096 Q6ZRN7 208 aaPredicted RBP11.49□□□□□ -0.57
TVP23A-202ENST00000456096 NRARPQ7Z6K4 114 aa11.49□□□□□ -0.57
TVP23A-202ENST00000456096 C11orf72Q8NBR9 251 aa11.49□□□□□ -0.57
TVP23A-202ENST00000456096 MITD1Q8WV92 249 aa11.49□□□□□ -0.57
TVP23A-202ENST00000456096 L7N2F9 121 aa11.48□□□□□ -0.57
TVP23A-202ENST00000456096 M0R3E3 92 aa11.48□□□□□ -0.57
TVP23A-202ENST00000456096 BTCP35070 178 aa11.48□□□□□ -0.57
TVP23A-202ENST00000456096 VAMP2P63027 116 aa11.48□□□□□ -0.57
TVP23A-202ENST00000456096 ERCC8Q13216 396 aa11.48□□□□□ -0.57
TVP23A-202ENST00000456096 RAB31Q13636 194 aa11.48□□□□□ -0.57
TVP23A-202ENST00000456096 C18orf15Q96N68 181 aa11.48□□□□□ -0.57
TVP23A-202ENST00000456096 TRGV1A0A0A0MS02 117 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 C7orf71A4D174 169 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 CST7O76096 145 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 FUSP35637 526 aaKnown RBP eCLIP11.47□□□□□ -0.57
TVP23A-202ENST00000456096 BCAP31P51572 246 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 CD300CQ08708 224 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
TVP23A-202ENST00000456096 DMBT1Q9UGM3 2413 aaPredicted RBP11.46□□□□□ -0.57
TVP23A-202ENST00000456096 CENPXA8MT69 81 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 KLLNB2CW77 178 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 CCSO14618 274 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 SIVA1O15304 175 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 ZNF253O75346 499 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 ZNF324O75467 553 aaPredicted RBP11.46□□□□□ -0.57
TVP23A-202ENST00000456096 BTN1A1Q13410 526 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 PFDN5Q99471 154 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 SDHCQ99643 169 aaPredicted RBP11.46□□□□□ -0.57
TVP23A-202ENST00000456096 WDR83OSQ9Y284 106 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
TVP23A-202ENST00000456096 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.57
TVP23A-202ENST00000456096 TRBV19A0A075B6N1 114 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 EPM2AB3EWF7 344 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 SPINK4O60575 86 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 NXPH4O95158 308 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 RNASE4P34096 147 aaKnown RBP11.45□□□□□ -0.58
TVP23A-202ENST00000456096 CAV2P51636 162 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 ZNF846Q147U1 533 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 EIF4E3Q8N5X7 224 aaKnown RBP11.45□□□□□ -0.58
TVP23A-202ENST00000456096 MRPL53Q96EL3 112 aaKnown RBP11.45□□□□□ -0.58
TVP23A-202ENST00000456096 FAM19A4Q96LR4 140 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 LINC00467Q9BRT7 94 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 AGPAT4-IT1Q9H0P7 198 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 SLC39A9Q9NUM3 307 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 UQCC1Q9NVA1 299 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms