RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GOLT1AQ6ZVE7 132 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 KLHDC1Q8N7A1 406 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 ASCL2Q99929 193 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 RPP21Q9H633 154 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 S4R3C0 116 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 MAST4O15021 2626 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 TRAV25A0A0B4J276 109 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 ZNF705GA8MUZ8 300 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 CHEK1O14757 476 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 P01737 135 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 RPS10P46783 165 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 CMC4P56277 68 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 HIST1H1AQ02539 215 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 NOTCH2Q04721 2471 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 KLF5Q13887 457 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 Q6ZSV7 163 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 C8orf86Q6ZUL3 223 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 GBGT1Q8N5D6 347 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 TACC2O95359 2948 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 PDZD2O15018 2839 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 ITPR3Q14573 2671 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 LINC01619G3V211 115 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 SLC17A3O00476 420 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 SOCS3O14543 225 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 HLA-DQA1P01909 254 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 MGST1P10620 155 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 COA6Q5JTJ3 125 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 FAM162BQ5T6X4 162 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 EXOC3-AS1Q8N2X6 119 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 NUDT10Q8NFP7 164 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 NUDT11Q96G61 164 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 RHPN1-AS1Q9BWJ2 59 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 LINC00527Q9UJ94 153 aa5.22□□□□□ -1.57
ECHDC1-210ENST00000454859 UNC79Q9P2D8 2635 aa5.21□□□□□ -1.57
ECHDC1-210ENST00000454859 TGIF2-C20orf24A0A0A6YYL0 155 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 A0A1W2PPQ1 181 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 ZNF320A2RRD8 509 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 RPLP1P05386 114 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 S100A6P06703 90 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 ZNF138P52744 262 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 GNG5P63218 68 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 PAFAH1B2P68402 229 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 SMUG1Q53HV7 270 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 ACTL10Q5JWF8 245 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 TMEM78Q5T7P6 136 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 GATD1Q8NB37 220 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 DPF1Q92782 380 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 C16orf92Q96LL3 132 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 PRR25Q96S07 402 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 CELSR2Q9HCU4 2923 aa5.21□□□□□ -1.58
ECHDC1-210ENST00000454859 FAM181BA6NEQ2 426 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 RBPMS2Q6ZRY4 209 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 APRG1Q8IVJ8 170 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 OR2K2Q8NGT1 345 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 OR10J6PQ8NGY7 276 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 C17orf77Q96MU5 243 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 TSSC4Q9Y5U2 329 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 CRYBG3Q68DQ2 2970 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 CENPEQ02224 2701 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 POLQO75417 2590 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 LOC105371267A0A1B0GV96 52 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 TMEM213A2RRL7 107 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 FABP5P3A8MUU1 101 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 IGHV3-11P01762 117 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 SNRPD3P62318 126 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST2H2BCQ6DN03 193 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 UNQ9165/PRO28630Q6UXU0 137 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 PRNTQ86SH4 94 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 CLUHP3Q96NS8 147 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 URGCP-MRPS24S4R325 110 aa5.2□□□□□ -1.58
ECHDC1-210ENST00000454859 TRAV8-2A0A0B4J237 113 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 TRAV34A0A0B4J273 112 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 PGPEP1LA6NFU8 196 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 C5orf52A6NGY3 159 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 CYSRT1A8MQ03 144 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 F2Z2F3 143 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 UBE2CO00762 179 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 PHOX2AO14813 284 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 DUSP14O95147 198 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 TRBV12-3P01733 135 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 HOXD3P31249 432 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 OR5I1Q13606 314 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 FHL3Q13643 280 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 OR1N2Q8NGR9 330 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 BORCS7Q96B45 105 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 LINC00479Q96M42 142 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 PACRGQ96M98 296 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 C2orf70A6NJV1 201 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 TCF21O43680 179 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 LY6G6DO95868 133 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 MED14OSP0DP75 135 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 CRISP2P16562 243 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 RIGQ13278 110 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 DNLZQ5SXM8 178 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 TCF24Q7RTU0 167 aa5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-210ENST00000454859 M0R3E3 92 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 APOHP02749 345 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms