RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 FAM74A3Q4VXF1 159 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 C9orf66Q5T8R8 295 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 LCN12Q6JVE5 192 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 CYB561D1Q8N8Q1 229 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 ATG101Q9BSB4 218 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SELENOKQ9Y6D0 94 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 COL6A5A8TX70 2615 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TRAV8-2A0A0B4J237 113 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 OR4C46A6NHA9 309 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 F8W036 122 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SFTA3P0C7M3 94 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TFPI2P48307 235 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 CMC4P56277 68 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 LINC00052Q96N35 136 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SPAG8Q99932 426 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SEC11CQ9BY50 192 aa9.42□□□□□ -0.9
HLA-DPA1-244ENST00000453337 FBLL1A6NHQ2 334 aaKnown RBP9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 ZNF727A8MUV8 499 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 DIRC3C9JPN6 131 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 M0R3E3 92 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TCRAP04437 139 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 S100A1P23297 94 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 AKR1C3P42330 323 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 CNN1P51911 297 aaKnown RBP9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 RIPPLY3P57055 190 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TAS2R60P59551 318 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 IGFL4Q6B9Z1 124 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 ZNF738Q8NE65 137 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 RPH3ALQ9UNE2 315 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
HLA-DPA1-244ENST00000453337 RBAKDNA6NC62 111 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 GNG5P63218 68 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 GUCA2BQ16661 112 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 GOLT1AQ6ZVE7 132 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 RNF182Q8N6D2 247 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 C2CD4CQ8TF44 421 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SMIM7Q9BQ49 75 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 GPR61Q9BZJ8 451 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 PARLQ9H300 379 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 STAB1Q9NY15 2570 aa9.4□□□□□ -0.9
HLA-DPA1-244ENST00000453337 ATP6V1G1O75348 118 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 UBE2G1P62253 170 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TMEM183BQ1AE95 376 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ZNF674Q2M3X9 581 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 C10orf91Q5T1B1 145 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 FMC1Q96HJ9 113 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TRBV6-1A0A0K0K1D8 114 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 IZUMO1RA6ND01 250 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ZNF688P0C7X2 276 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 OR10J6PQ8NGY7 276 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 LINC00479Q96M42 142 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 MDFIQ99750 246 aa9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ZNF256Q9Y2P7 627 aaPredicted RBP9.38□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TRAV34A0A0B4J273 112 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 C9JCJ5 164 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 GNG4P50150 75 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 EBLN2Q6P2I7 272 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 BAGE2Q86Y30 109 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 DERL1Q9BUN8 251 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 NAT8Q9UHE5 227 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 PSG8Q9UQ74 426 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 CARHSP1Q9Y2V2 147 aaKnown RBP9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
HLA-DPA1-244ENST00000453337 NOTCH3Q9UM47 2321 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 IGKV2-40A0A087WW87 121 aaPredicted RBP9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 PRAC2D3DTV9 90 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 IGKV2D-40P01614 121 aaPredicted RBP9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 FLI1Q01543 452 aaPredicted RBP9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 PRR31Q5SQ13 230 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 SAPCD1Q5SSQ6 148 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 FAM24BQ8N5W8 94 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 TVP23CQ96ET8 276 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 SMIM12Q96EX1 92 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 PPP1R14DQ9NXH3 145 aa9.36□□□□□ -0.91
HLA-DPA1-244ENST00000453337 WIPF1O43516 503 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 APOC3P02656 99 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 IGLL1P15814 213 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 DEFB131AP59861 70 aa9.35□□□□□ -0.91
HLA-DPA1-244ENST00000453337 PNRC1Q12796 327 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms