RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 C11orf1Q9H5F2 150 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 LYRM2Q9NU23 88 aaPredicted RBP9.16□□□□□ -0.94
CHD3-206ENST00000452447 DNAH17Q9UFH2 4485 aa9.15□□□□□ -0.94
CHD3-206ENST00000452447 UBE2L5PA0A1B0GUS4 154 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.95
CHD3-206ENST00000452447 HTN1P15515 57 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 TSPOP30536 169 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 CDKN1BP46527 198 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 BAXQ07812 192 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 RAB32Q13637 225 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 FCN2Q15485 313 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 MIC13Q5XKP0 118 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 OR1L4Q8NGR5 311 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 PFDN5Q99471 154 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 WDR83OSQ9Y284 106 aa9.15□□□□□ -0.95
CHD3-206ENST00000452447 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 H3BTX0 84 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 DEFB130BP0DP73 79 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 DEFB130AP0DP74 79 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 TAS2R60P59551 318 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 MORN5Q5VZ52 161 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 TMEM252Q8N6L7 170 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 OR10J6PQ8NGY7 276 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 PXMP4Q9Y6I8 212 aa9.14□□□□□ -0.95
CHD3-206ENST00000452447 IGLC2P0DOY2 106 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 AZU1P20160 251 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
CHD3-206ENST00000452447 IL15RAQ13261 267 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 ATP6V1FQ16864 119 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 VWC2Q2TAL6 325 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 TMEM88Q6PEY1 159 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 LINC00336Q6ZUF6 198 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 SLC7A5P1Q8MH63 180 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
CHD3-206ENST00000452447 TRAV5A0A0B4J249 113 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 IGSF23A1L1A6 192 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 H3BQ15 152 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 M0R2N4 97 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 SLC17A3O00476 420 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 FGF7P21781 194 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 GUK1Q16774 197 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 THAP6Q8TBB0 222 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 SUN5Q8TC36 379 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 C16orf74Q96GX8 76 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 NACAE9PAV3 2078 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 C15orf53Q8NAA6 179 aa9.12□□□□□ -0.95
CHD3-206ENST00000452447 SAT2Q96F10 170 aaPredicted RBP9.12□□□□□ -0.95
CHD3-206ENST00000452447 TIMM8BQ9Y5J9 83 aaPredicted RBP9.12□□□□□ -0.95
CHD3-206ENST00000452447 LOC105371267A0A1B0GV96 52 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 PRAC2D3DTV9 90 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 F5H768 121 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 H7BYZ3 331 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 MPDU1O75352 247 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 H2BFSP57053 126 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 RNF212Q495C1 297 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 TCTE3Q8IZS6 198 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 OR2T35Q8NGX2 323 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 PPP1R1CQ8WVI7 109 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
CHD3-206ENST00000452447 IGLV2-18A0A075B6J9 118 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 ATP5G1P05496 136 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 ATP5G3P48201 142 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 LGALS9BQ3B8N2 356 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 CCDC28AQ8IWP9 274 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 TMEM263Q8WUH6 116 aaKnown RBP9.1□□□□□ -0.95
CHD3-206ENST00000452447 PARD6GQ9BYG4 376 aaPredicted RBP9.1□□□□□ -0.95
CHD3-206ENST00000452447 SLC25A31Q9H0C2 315 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 ZNF586Q9NXT0 402 aa9.1□□□□□ -0.95
CHD3-206ENST00000452447 CBY3A6NI87 242 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 E5RGE8 158 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 ZNF253O75346 499 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 SIX6O95475 246 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 IFITM2Q01629 132 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 NHLH2Q02577 135 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 LRRC37A5PQ49AS3 106 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 OR5C1Q8NGR4 320 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 ATG101Q9BSB4 218 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 NPCDR1Q9BY65 106 aa9.09□□□□□ -0.95
CHD3-206ENST00000452447 NOP10Q9NPE3 64 aaKnown RBP9.09□□□□□ -0.95
CHD3-206ENST00000452447 J3KRW8 73 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 MPC2O95563 127 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 HERC2O95714 4834 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 LEPP41159 167 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 CTAG1AP78358 180 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 KIR3DS1Q14943 382 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 GFI1BQ5VTD9 330 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 SLC51BQ86UW2 128 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 INO80EQ8NBZ0 244 aaPredicted RBP9.08□□□□□ -0.96
CHD3-206ENST00000452447 RNASE8Q8TDE3 154 aaKnown RBP9.08□□□□□ -0.96
CHD3-206ENST00000452447 HYLS1Q96M11 299 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 TMEM14CQ9P0S9 112 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 TIMM9Q9Y5J7 89 aa9.08□□□□□ -0.96
CHD3-206ENST00000452447 TRBV19A0A075B6N1 114 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 NUDT3O95989 172 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 CT45A10P0DMU9 189 aa9.07□□□□□ -0.96
CHD3-206ENST00000452447 HIST1H1EP10412 219 aaKnown RBP9.07□□□□□ -0.96
CHD3-206ENST00000452447 PDE6HQ13956 83 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms