RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 Q6ZRU5 148 aa4.81□□□□□ -1.64
RBM39-218ENST00000449489 ARRDC1Q8N5I2 433 aa4.81□□□□□ -1.64
RBM39-218ENST00000449489 THAP8Q8NA92 274 aa4.81□□□□□ -1.64
RBM39-218ENST00000449489 ZNF680Q8NEM1 530 aa4.81□□□□□ -1.64
RBM39-218ENST00000449489 RBPMSQ93062 196 aaKnown RBP4.81□□□□□ -1.64
RBM39-218ENST00000449489 S100A16Q96FQ6 103 aaKnown RBP4.81□□□□□ -1.64
RBM39-218ENST00000449489 MRPL32Q9BYC8 188 aaKnown RBP4.81□□□□□ -1.64
RBM39-218ENST00000449489 SLC25A22Q9H936 323 aa4.81□□□□□ -1.64
RBM39-218ENST00000449489 FUT9Q9Y231 359 aa4.81□□□□□ -1.64
RBM39-218ENST00000449489 RCL1Q9Y2P8 373 aaKnown RBP4.81□□□□□ -1.64
RBM39-218ENST00000449489 A0A087X0K7 114 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 CEBPZOSA8MTT3 80 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 SPINK4O60575 86 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 HOXB5P09067 269 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 HLA-DMAP28067 261 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 PRSS3P35030 304 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 LAGE3Q14657 143 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 GPR107Q5VW38 600 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 IQCF2Q8IXL9 164 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 C11orf72Q8NBR9 251 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 SLC35E1Q96K37 410 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 ODF3Q96PU9 254 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 VGLL1Q99990 258 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 PAXXQ9BUH6 204 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 TMEM56-RWDD3S4R434 201 aa4.8□□□□□ -1.64
RBM39-218ENST00000449489 IGKV1OR2-108A0A075B7D4 117 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 TRGV1A0A0A0MS02 117 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 IGHV3-38A0A0C4DH36 116 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 K7EQD1 137 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 PRAF2O60831 178 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 ORM1P02763 201 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 PRB4P10163 310 aaPredicted RBP4.79□□□□□ -1.64
RBM39-218ENST00000449489 RPL7P18124 248 aaKnown RBP4.79□□□□□ -1.64
RBM39-218ENST00000449489 CXCL2P19875 107 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 SRIP30626 198 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 SDC2P34741 201 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 HNRNPA3P51991 378 aaKnown RBP4.79□□□□□ -1.64
RBM39-218ENST00000449489 RPL37AP61513 92 aaKnown RBP4.79□□□□□ -1.64
RBM39-218ENST00000449489 PIK3CD-AS1Q5SR53 167 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 SH2D6Q7Z4S9 175 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 LHFPL1Q86WI0 220 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 LGI3Q8N145 548 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
RBM39-218ENST00000449489 RNASE11Q8TAA1 199 aaKnown RBP4.79□□□□□ -1.64
RBM39-218ENST00000449489 GPX8Q8TED1 209 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 RPUSD4Q96CM3 377 aaKnown RBP4.79□□□□□ -1.64
RBM39-218ENST00000449489 TMEM222Q9H0R3 208 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 CACNG5Q9UF02 275 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 SSR3Q9UNL2 185 aa4.79□□□□□ -1.64
RBM39-218ENST00000449489 GAS8-AS1O95177 125 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 PGAM2P15259 253 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 TNFSF8P32971 234 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 FGL1Q08830 312 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 IBA57Q5T440 356 aaKnown RBP4.78□□□□□ -1.64
RBM39-218ENST00000449489 CCDC190Q86UF4 302 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 CCDC71LQ8N9Z2 235 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 BPIFCQ8NFQ6 507 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 ZFAND1Q8TCF1 268 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 GLYATL2Q8WU03 294 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 TMEM37Q8WXS4 190 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 IL22RA2Q969J5 263 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 TXNDC17Q9BRA2 123 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 TMEM147Q9BVK8 224 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 VCXQ9H320 206 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 DNAJC4Q9NNZ3 241 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 GSN-AS1Q9NRJ2 163 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 COPZ2Q9P299 210 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 C11orf21Q9P2W6 132 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 HSPB7Q9UBY9 170 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 RNF24Q9Y225 148 aa4.78□□□□□ -1.64
RBM39-218ENST00000449489 USP17L23D6RBM5 183 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 H3BRN7 92 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 TCL1AP56279 114 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 WFDC2Q14508 124 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 MEF2DQ14814 521 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 SP6Q3SY56 376 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 UBE2NLQ5JXB2 153 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 C10orf25Q5T742 122 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 S100A7AQ86SG5 101 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 CROCCP3Q8IVE0 287 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 OR1S1Q8NH92 325 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 DTD1Q8TEA8 209 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 ZNF431Q8TF32 576 aaPredicted RBP4.77□□□□□ -1.65
RBM39-218ENST00000449489 SHANK2-AS3Q9BTD1 123 aa4.77□□□□□ -1.65
RBM39-218ENST00000449489 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 TEX13DA0A0J9YY54 714 aaPredicted RBP4.76□□□□□ -1.65
RBM39-218ENST00000449489 SLC25A5P05141 298 aaKnown RBP4.76□□□□□ -1.65
RBM39-218ENST00000449489 SULT1A3P0DMM9 295 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 SULT1A4P0DMN0 295 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 ORM2P19652 201 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 LEPP41159 167 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 PLP1P60201 277 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 MXD1Q05195 221 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 PXDC1Q5TGL8 231 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 CFAP161Q6P656 301 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 ACOT7LQ6ZUV0 252 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 SELENOHQ8IZQ5 122 aaKnown RBP4.76□□□□□ -1.65
RBM39-218ENST00000449489 EIF4E3Q8N5X7 224 aaKnown RBP4.76□□□□□ -1.65
RBM39-218ENST00000449489 TERB2Q8NHR7 220 aa4.76□□□□□ -1.65
RBM39-218ENST00000449489 LHFPL5Q8TAF8 219 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms