RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 PRR20CP86479 221 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 PRR20DP86480 221 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 PRR20BP86481 221 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 PRR20AP86496 221 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 TMEM249Q2WGJ8 235 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 C14orf178Q8N769 122 aaPredicted RBP8.34□□□□□ -1.07
CTC1-202ENST00000449476 C11orf52Q96A22 123 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 POLR3KQ9Y2Y1 108 aaPredicted RBP8.34□□□□□ -1.07
CTC1-202ENST00000449476 A0A087X0K7 114 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 FAM231BA6NCW3 169 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 DLEU1O43261 78 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 UNQ6494/PRO21346Q6UXR6 183 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 PCDH15Q96QU1 1955 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 DEFB104AQ8WTQ1 72 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 LINC01549A6NIU2 74 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 CD28P10747 220 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 ZNF124Q15973 351 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 CT83Q5H943 113 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 TMEM158Q8WZ71 300 aa8.34□□□□□ -1.07
CTC1-202ENST00000449476 OVOL3O00110 214 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 FAM231DQ6ZW35 169 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
CTC1-202ENST00000449476 MEGF9Q9H1U4 602 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 MRPS16Q9Y3D3 137 aaKnown RBP8.33□□□□□ -1.08
CTC1-202ENST00000449476 TMEM213A2RRL7 107 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 FAM223BA6NKX1 122 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 FAM223AQ8IWN6 122 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 FAM110DQ8TAY7 271 aaPredicted RBP8.33□□□□□ -1.08
CTC1-202ENST00000449476 G3V318 75 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 ZC2HC1BQ5TFG8 222 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 BCL6BQ8N143 479 aaPredicted RBP8.33□□□□□ -1.08
CTC1-202ENST00000449476 TMEM75Q8N9X5 138 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 ZNF479Q96JC4 524 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 PLA2G2EQ9NZK7 142 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 KAAG1Q9UBP8 84 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 ZNF876PQ49A33 203 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 PIP4P2Q8N4L2 257 aa8.33□□□□□ -1.08
CTC1-202ENST00000449476 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 EREGO14944 169 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 HOXA3O43365 443 aaPredicted RBP8.32□□□□□ -1.08
CTC1-202ENST00000449476 SLAQ13239 276 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 C20orf144Q9BQM9 153 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 TRAV2A0A0B4J234 112 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 RUSC1-AS1Q66K80 236 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 RNF182Q8N6D2 247 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 KLF2Q9Y5W3 355 aaPredicted RBP8.32□□□□□ -1.08
CTC1-202ENST00000449476 WDR87Q6ZQQ6 2873 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 IGLC1P0CG04 106 aa8.32□□□□□ -1.08
CTC1-202ENST00000449476 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 DAZ1Q9NQZ3 744 aaKnown RBP8.31□□□□□ -1.08
CTC1-202ENST00000449476 DKK4Q9UBT3 224 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 EML6Q6ZMW3 1958 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 SAMD5Q5TGI4 173 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 C8orf49Q96NF6 230 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 K7EM74 188 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 IGFL2Q6UWQ7 119 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 FXYD5Q96DB9 178 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 PCNX3Q9H6A9 2034 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 VCYO14598 125 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 IGHV2-70P01814 119 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 VWC2Q2TAL6 325 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 SPRNQ5BIV9 151 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 Q6ZWC4 215 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 CTSZQ9UBR2 303 aa8.31□□□□□ -1.08
CTC1-202ENST00000449476 SCGB1A1P11684 91 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 PLNP26678 52 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 THAP8Q8NA92 274 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 CSTL1Q9H114 145 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 IGHV3-73A0A0B4J1V6 119 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 FAM104BQ5XKR9 115 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 RCHY1Q96PM5 261 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 ZNF106Q9H2Y7 1883 aaKnown RBP8.3□□□□□ -1.08
CTC1-202ENST00000449476 TRGV4A0A0C4DH28 118 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 SMIM27A0A1W2PRY6 76 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 HTN3P15516 51 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 TDGF1P3P51864 188 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 ASPHD1Q5U4P2 390 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 TMEM14CQ9P0S9 112 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 LSM4Q9Y4Z0 139 aaKnown RBP8.3□□□□□ -1.08
CTC1-202ENST00000449476 PRR25Q96S07 402 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 DYSFO75923 2080 aa8.3□□□□□ -1.08
CTC1-202ENST00000449476 IGHV2-70DA0A0C4DH43 119 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 A0A0U1RRA0 63 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 MSMBP08118 114 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 STPG4Q8N801 248 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 ALPK3Q96L96 1907 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 H3BRN7 92 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 LHBP01229 141 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 TDGF1P13385 188 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 IL17RELQ6ZVW7 336 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
CTC1-202ENST00000449476 IGHV1-69DA0A0B4J2H0 117 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 PRSS46E5RG02 174 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 IGHV1-69P01742 117 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 SSBP2P81877 361 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms