RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 YLPM1P49750 1951 aaKnown RBP8.18□□□□□ -1.1
SCN10A-201ENST00000449082 ELANEP08246 267 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 TMEM158Q8WZ71 300 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 SLX1AQ9BQ83 275 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 SPTBN1Q01082 2364 aaKnown RBP8.17□□□□□ -1.1
SCN10A-201ENST00000449082 NPC2P61916 151 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 KAAG1Q9UBP8 84 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 IGF2-ASQ6U949 168 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 POLEQ07864 2286 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 CDK2AP2O75956 126 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 LY6G5BQ8NDX9 201 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
SCN10A-201ENST00000449082 C21orf62-AS1Q17RA5 79 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 AMN1Q8IY45 258 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 MRPL27Q9P0M9 148 aaKnown RBP8.17□□□□□ -1.1
SCN10A-201ENST00000449082 NLRC5Q86WI3 1866 aa8.17□□□□□ -1.1
SCN10A-201ENST00000449082 HIST1H2BLQ99880 126 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 AZU1P20160 251 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 ZNF492Q9P255 531 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 KIAA2026Q5HYC2 2103 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 F8WEM9 126 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 PRR31Q5SQ13 230 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 FNDC4Q9H6D8 234 aaPredicted RBP8.16□□□□□ -1.1
SCN10A-201ENST00000449082 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 LEPROTO15243 131 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 IGHV2-5P01817 119 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 SSBP2P81877 361 aaPredicted RBP8.16□□□□□ -1.1
SCN10A-201ENST00000449082 CFHR3Q02985 330 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 ZNF479Q96JC4 524 aa8.16□□□□□ -1.1
SCN10A-201ENST00000449082 TRBV19A0A075B6N1 114 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 GAGE12JA6NER3 117 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 A8MWV9 139 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 SHISA9B4DS77 424 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 SMKR1H3BMG3 65 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 C15orf65H3BRN8 121 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.15□□□□□ -1.1
SCN10A-201ENST00000449082 UBE2CO00762 179 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 GAGE1Q13065 139 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 GAGE4Q13068 117 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 GAGE5Q13069 117 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 GAGE13Q4V321 117 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 TIMM21Q9BVV7 248 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 H3BUA1 57 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 WISP1O95388 367 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 DMRTC2Q8IXT2 367 aaPredicted RBP8.15□□□□□ -1.1
SCN10A-201ENST00000449082 KLK9Q9UKQ9 250 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 KNCNA6PVL3 124 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 PLXNA2O75051 1894 aa8.15□□□□□ -1.1
SCN10A-201ENST00000449082 NDUFAF3Q9BU61 184 aa8.15□□□□□ -1.11
SCN10A-201ENST00000449082 ANAPC10Q9UM13 185 aa8.15□□□□□ -1.11
SCN10A-201ENST00000449082 CDKN1BP46527 198 aa8.15□□□□□ -1.11
SCN10A-201ENST00000449082 DMRTA1Q5VZB9 504 aa8.15□□□□□ -1.11
SCN10A-201ENST00000449082 DEFB113Q30KQ7 82 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 IGFL2Q6UWQ7 119 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 LINC00479Q96M42 142 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 COLCA2A8K830 154 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 FAM120AOSQ5T036 256 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 C8orf49Q96NF6 230 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 TRAV8-4A0A0B4J246 113 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 ZNF561-AS1K7EIQ3 104 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 VPREB3Q9UKI3 123 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 H3BRN7 92 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 ZMAT4Q9H898 229 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 TSSC4Q9Y5U2 329 aaPredicted RBP8.14□□□□□ -1.11
SCN10A-201ENST00000449082 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
SCN10A-201ENST00000449082 OVOL2Q9BRP0 275 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 LAMTOR3Q9UHA4 124 aa8.14□□□□□ -1.11
SCN10A-201ENST00000449082 IGHV2-70P01814 119 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 SPXQ9BT56 116 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 IGHV7-4-1A0A0J9YVY3 117 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 GAGE12BA1L429 117 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 PRSS46E5RG02 174 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 GAGE7O76087 117 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 GAGE12FP0CL80 117 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 GAGE12GP0CL81 117 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 GAGE12IP0CL82 117 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 SAMD5Q5TGI4 173 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 C1orf147Q96MC9 270 aaPredicted RBP8.13□□□□□ -1.11
SCN10A-201ENST00000449082 TMEM14CQ9P0S9 112 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 INS-IGF2F8WCM5 200 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 DOCK7Q96N67 2140 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 IGHV3-16A0A0C4DH30 117 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 I3L3M4 83 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 WT1P19544 449 aaPredicted RBP8.13□□□□□ -1.11
SCN10A-201ENST00000449082 GUSBP1Q15486 140 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 DEFB112Q30KQ8 113 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 ZNF524Q96C55 264 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 KLF2Q9Y5W3 355 aaPredicted RBP8.13□□□□□ -1.11
SCN10A-201ENST00000449082 ABCA4P78363 2273 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 ANAPC1Q9H1A4 1944 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 PAX9P55771 341 aa8.13□□□□□ -1.11
SCN10A-201ENST00000449082 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms