RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 LY6G6CO95867 125 aa10.55□□□□□ -0.72
USP39-206ENST00000448971 SPINK13Q1W4C9 94 aa10.55□□□□□ -0.72
USP39-206ENST00000448971 Q5BKY6 102 aa10.55□□□□□ -0.72
USP39-206ENST00000448971 INO80EQ8NBZ0 244 aaPredicted RBP10.55□□□□□ -0.72
USP39-206ENST00000448971 BLNKQ8WV28 456 aa10.55□□□□□ -0.72
USP39-206ENST00000448971 ZNF586Q9NXT0 402 aa10.55□□□□□ -0.72
USP39-206ENST00000448971 GOLT1BQ9Y3E0 138 aa10.55□□□□□ -0.72
USP39-206ENST00000448971 TIMM9Q9Y5J7 89 aa10.55□□□□□ -0.72
USP39-206ENST00000448971 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 BOLA2-SMG1P6H3BVE0 249 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 M0R2Z0 102 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 OR7C2O60412 319 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 ZNF253O75346 499 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 INSP01308 110 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
USP39-206ENST00000448971 AMTNQ6UX39 209 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 HSD17B11Q8NBQ5 300 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 OR10J6PQ8NGY7 276 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 C11orf45Q8TAV5 145 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 TMEM208Q9BTX3 173 aa10.54□□□□□ -0.72
USP39-206ENST00000448971 NUPR2A6NF83 97 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 A8MTW9 85 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 ZNF705FA8MVS1 300 aaPredicted RBP10.53□□□□□ -0.72
USP39-206ENST00000448971 AMBPP02760 352 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 OR10J4P0C629 311 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 UBE2L3P68036 154 aaKnown RBP10.53□□□□□ -0.72
USP39-206ENST00000448971 PDE6HQ13956 83 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 KHDC3LQ587J8 217 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 BAP18Q8IXM2 172 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 SAT2Q96F10 170 aaPredicted RBP10.53□□□□□ -0.72
USP39-206ENST00000448971 PAXXQ9BUH6 204 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 OR51M1Q9H341 326 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 AAMDCQ9H7C9 122 aa10.53□□□□□ -0.72
USP39-206ENST00000448971 VPS13DQ5THJ4 4388 aa10.52□□□□□ -0.72
USP39-206ENST00000448971 RNF222A6NCQ9 220 aa10.52□□□□□ -0.73
USP39-206ENST00000448971 RBMY1A1P0DJD3 496 aaKnown RBP10.52□□□□□ -0.73
USP39-206ENST00000448971 RBMY1CP0DJD4 496 aa10.52□□□□□ -0.73
USP39-206ENST00000448971 TAS2R45P59539 299 aa10.52□□□□□ -0.73
USP39-206ENST00000448971 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.73
USP39-206ENST00000448971 RBMY1FQ15415 496 aaKnown RBP10.52□□□□□ -0.73
USP39-206ENST00000448971 ACOT6Q3I5F7 207 aaPredicted RBP10.52□□□□□ -0.73
USP39-206ENST00000448971 ZNF705AQ6ZN79 300 aaPredicted RBP10.52□□□□□ -0.73
USP39-206ENST00000448971 FAM167A-AS1Q96KT0 104 aa10.52□□□□□ -0.73
USP39-206ENST00000448971 IGF2BP2-AS1Q96M15 143 aa10.52□□□□□ -0.73
USP39-206ENST00000448971 TNFSF18Q9UNG2 199 aa10.52□□□□□ -0.73
USP39-206ENST00000448971 TRAV12-2A0A075B6T6 113 aa10.51□□□□□ -0.73
USP39-206ENST00000448971 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
USP39-206ENST00000448971 HBE1P02100 147 aa10.51□□□□□ -0.73
USP39-206ENST00000448971 M6PRP20645 277 aa10.51□□□□□ -0.73
USP39-206ENST00000448971 RAB2AP61019 212 aa10.51□□□□□ -0.73
USP39-206ENST00000448971 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
USP39-206ENST00000448971 RFNGQ9Y644 331 aa10.51□□□□□ -0.73
USP39-206ENST00000448971 KIAA1109Q2LD37 5005 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 A0A1W2PPV4 95 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 M0R3E3 92 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 ARPC5O15511 151 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 NDUFB4O95168 129 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 NBEAP1P0C6P0 100 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 EMP1P54849 157 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 LCE2AQ5TA79 106 aaPredicted RBP10.5□□□□□ -0.73
USP39-206ENST00000448971 FAM122CQ6P4D5 195 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 CEMP1Q6PRD7 247 aaPredicted RBP10.5□□□□□ -0.73
USP39-206ENST00000448971 C1orf158Q8N1D5 194 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 RPP25LQ8N5L8 163 aaKnown RBP10.5□□□□□ -0.73
USP39-206ENST00000448971 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 NEU1Q99519 415 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 PRELID1Q9Y255 219 aa10.5□□□□□ -0.73
USP39-206ENST00000448971 BORCS7-ASMTA0A0B4J1R7 106 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 G3V3Q6 166 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 SMLR1H3BR10 107 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 EIF3GO75821 320 aaKnown RBP eCLIP10.49□□□□□ -0.73
USP39-206ENST00000448971 ATP6V0CP27449 155 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 CDKN1BP46527 198 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 ICAM4Q14773 271 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 RRN3P1Q2M238 152 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 OR10G9Q8NGN4 311 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
USP39-206ENST00000448971 FXYD5Q96DB9 178 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 PHYHIPLQ96FC7 376 aa10.49□□□□□ -0.73
USP39-206ENST00000448971 PSMG3Q9BT73 122 aaPredicted RBP10.49□□□□□ -0.73
USP39-206ENST00000448971 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
USP39-206ENST00000448971 RYR1P21817 5038 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 LOC102723971A0A1B0GUV8 181 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 J3KRW8 73 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 CRXO43186 299 aaPredicted RBP10.48□□□□□ -0.73
USP39-206ENST00000448971 TSPOP30536 169 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 CDC34P49427 236 aaPredicted RBP10.48□□□□□ -0.73
USP39-206ENST00000448971 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
USP39-206ENST00000448971 OR2G3Q8NGZ4 309 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 SH3BGRL3Q9H299 93 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 CELA1Q9UNI1 258 aa10.48□□□□□ -0.73
USP39-206ENST00000448971 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
USP39-206ENST00000448971 NPIPB6E9PJ23 425 aa10.47□□□□□ -0.73
USP39-206ENST00000448971 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
USP39-206ENST00000448971 IGKV2-40A0A087WW87 121 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms