RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LINC00482Q8N8I6 264 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR10G4Q8NGN3 311 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR10G9Q8NGN4 311 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR10G7Q8NGN6 311 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 RPL36ALQ969Q0 106 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 TMEM191AQ9H0A3 160 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 KNCNA6PVL3 124 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 TMEM88Q6PEY1 159 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 VN1R17PQ8TDU5 208 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 GATAD1Q8WUU5 269 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZC2HC1AQ96GY0 325 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 M0R3E3 92 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 PPIFP30405 207 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ISOC2Q96AB3 205 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZFP30Q9Y2G7 519 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 STAB1Q9NY15 2570 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 A6NDX4 124 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 G3V3Q6 166 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 CLDN34H7C241 214 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 SRSF10O75494 262 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 TMEM255AQ5JRV8 349 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 ADAMTSL5Q6ZMM2 481 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 FSTL3O95633 263 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF90Q03938 601 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 CD300EQ496F6 205 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 C2orf88Q9BSF0 95 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 AQP10Q96PS8 301 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A1B0GWJ7 208 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A1W2PPR1 153 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 C9orf170A2RU37 121 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 GZMBP10144 247 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 GPX4P36969 197 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 ASIPP42127 132 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 NKX2-5P52952 324 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 MRPL23Q16540 153 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF383Q8NA42 475 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 PRSS3P2Q8NHM4 247 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 HLA-DMBP28068 263 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 MSMPQ1L6U9 139 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 ASB13Q8WXK3 278 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 SLC25A39Q9BZJ4 359 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 F11RQ9Y624 299 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 AGRNO00468 2067 aa4.45□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A0J9YWU9 116 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 SLC35B3Q9H1N7 401 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 MRPS16Q9Y3D3 137 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF292O60281 2723 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 H3BMM0 161 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHG2P01859 326 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 ANGP03950 147 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 AZU1P20160 251 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 C9orf139Q6ZV77 190 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 UBE2WQ96B02 151 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV4OR15-8A0A075B7B6 117 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A087WW49 117 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 LINC01548A6NM66 108 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 CNTFRP26992 372 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 NMUP48645 174 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 CD200R1LQ6Q8B3 271 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 H3BTX0 84 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 NDUFA4O00483 81 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 GYPEP15421 78 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 IRF3Q14653 427 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 SPINK13Q1W4C9 94 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 CYP2G1PQ6ZSU1 146 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 NOP10Q9NPE3 64 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 GPR132Q9UNW8 380 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 ANKRD20A5PA0PJZ0 165 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 FAM74A7A6NL05 159 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 FAM74A3Q4VXF1 159 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 SPRNQ5BIV9 151 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 Q8N7P7 452 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 C8orf31Q8N9H6 132 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR11H4Q8NGC9 324 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR52E5Q8NH55 327 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 PPP1R1CQ8WVI7 109 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 OR10C1Q96KK4 312 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 PRR4Q16378 134 aa4.44□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGKV3D-20A0A0C4DH25 116 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 UMAD1C9J7I0 102 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 MEIG1Q5JSS6 88 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 DERL1Q9BUN8 251 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 CENPEQ02224 2701 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 NAPSAO96009 420 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV3-30P01768 117 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV3-33P01772 117 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 C8orf88P0DMB2 117 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV3-30-3P0DP02 117 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 IGHV3-30-5P0DP03 117 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 PSG3Q16557 428 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 C17orf58Q2M2W7 97 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 NXF2Q9GZY0 626 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 SPANXB1Q9NS25 103 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 TRANK1O15050 2925 aa4.43□□□□□ -1.7
CDC42BPA-209ENST00000448940 LRP4O75096 1905 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms