RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 FAM219AQ8IW50 185 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 Q8NBF4 154 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 OR52E5Q8NH55 327 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 TMEM263Q8WUH6 116 aaKnown RBP3.91□□□□□ -1.78
USP49-205ENST00000448078 RASL10AQ92737 203 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 ACY3Q96HD9 319 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 SEC22AQ96IW7 307 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 GPR82Q96P67 336 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 C20orf144Q9BQM9 153 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 RSG1Q9BU20 258 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 GPN1Q9HCN4 374 aaPredicted RBP3.91□□□□□ -1.78
USP49-205ENST00000448078 S100A14Q9HCY8 104 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.91□□□□□ -1.78
USP49-205ENST00000448078 RNF24Q9Y225 148 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 ICOSQ9Y6W8 199 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 CEBPZOSA8MTT3 80 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 F6UB75 175 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 BOLA2-SMG1P6H3BVE0 249 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 M0R2Z0 102 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 SSX5O60225 188 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 IGLC1P0CG04 106 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 PTHLHP12272 177 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 AZU1P20160 251 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 CNN1P51911 297 aaKnown RBP3.9□□□□□ -1.79
USP49-205ENST00000448078 ATP5IP56385 69 aaPredicted RBP3.9□□□□□ -1.79
USP49-205ENST00000448078 ASAH1Q13510 395 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 TRIM16LQ309B1 348 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 SPINK9Q5DT21 86 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 PRSS54Q6PEW0 395 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 OR11H7Q8NGC8 314 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 OR1B1Q8NGR6 318 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 PCNPQ8WW12 178 aaKnown RBP3.9□□□□□ -1.79
USP49-205ENST00000448078 MRGPRFQ96AM1 343 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 S100A16Q96FQ6 103 aaKnown RBP3.9□□□□□ -1.79
USP49-205ENST00000448078 MGLLQ99685 303 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 SOSTQ9BQB4 213 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 GSN-AS1Q9NRJ2 163 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 RHBDL2Q9NX52 303 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 VPS13BQ7Z7G8 4022 aa3.9□□□□□ -1.79
USP49-205ENST00000448078 TRDV1A0A1B0GX56 115 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 CRYM-AS1A6NIL9 109 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 B3GALNT1O75752 331 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 PMP2P02689 132 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 FCER2P06734 321 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 CRYGDP07320 174 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 DNAH10OSP0CZ25 163 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 PGAM2P15259 253 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 GATA1P15976 413 aaPredicted RBP3.89□□□□□ -1.79
USP49-205ENST00000448078 DEFB1P60022 68 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 LYZP61626 148 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 HAMPP81172 84 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 FGL1Q08830 312 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 PSG3Q16557 428 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 C2orf83Q53S99 150 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 NEGR1Q7Z3B1 354 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 LRTM2Q8N967 370 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 ZNF738Q8NE65 137 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 OR4D5Q8NGN0 318 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 AUNIPQ9H7T9 357 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 FKBP14Q9NWM8 211 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 LSM2Q9Y333 95 aaKnown RBP3.89□□□□□ -1.79
USP49-205ENST00000448078 TMEM56-RWDD3S4R434 201 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 U3KQ87 197 aa3.89□□□□□ -1.79
USP49-205ENST00000448078 FAT1Q14517 4588 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 TRAV12-2A0A075B6T6 113 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 A0A096LPF7 62 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 SMIM31A0A1B0GVY4 71 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 SOCS3O14543 225 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 PRM2P04554 102 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 GPX4P36969 197 aaPredicted RBP3.88□□□□□ -1.79
USP49-205ENST00000448078 CDKN1BP46527 198 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 HIST1H1AQ02539 215 aaPredicted RBP3.88□□□□□ -1.79
USP49-205ENST00000448078 LYPD5Q6UWN5 251 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 HSD17B11Q8NBQ5 300 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 ZFAND1Q8TCF1 268 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 TMEM37Q8WXS4 190 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 GPR146Q96CH1 333 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 SLC35E1Q96K37 410 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 SH3BGRL3Q9H299 93 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 SLC25A22Q9H936 323 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 COPZ2Q9P299 210 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 PRO0255Q9UI72 69 aa3.88□□□□□ -1.79
USP49-205ENST00000448078 A8MTW9 85 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 CRXO43186 299 aaPredicted RBP3.87□□□□□ -1.79
USP49-205ENST00000448078 ZNF324O75467 553 aaPredicted RBP3.87□□□□□ -1.79
USP49-205ENST00000448078 OR5AC1P0C628 307 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 SRIP30626 198 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 PRSS3P35030 304 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 RCVRNP35243 200 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 RAB11AP62491 216 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 DAZ2Q13117 558 aaKnown RBP3.87□□□□□ -1.79
USP49-205ENST00000448078 OR2F1Q13607 317 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 GPR107Q5VW38 600 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 C22orf42Q6IC83 251 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
USP49-205ENST00000448078 AMTNQ6UX39 209 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 BAP18Q8IXM2 172 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 Q8N814 137 aa3.87□□□□□ -1.79
USP49-205ENST00000448078 CCDC71LQ8N9Z2 235 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms