RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 TMEM213A2RRL7 107 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 S100PP25815 95 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 HOXD3P31249 432 aaPredicted RBP12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 ERVFC1-1P60608 527 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 LCN12Q6JVE5 192 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 C8orf86Q6ZUL3 223 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 Q86TA4 180 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 C1QL4Q86Z23 238 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 URGCP-MRPS24S4R325 110 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 TRAV8-2A0A0B4J237 113 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 RBAKDNA6NC62 111 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 INAFM1C9JVW0 142 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 MGST1P10620 155 aaKnown RBP12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 RAB5AP20339 215 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 SGK494Q96LW2 274 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 PSG8Q9UQ74 426 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 V9GYV3 84 aa12.93□□□□□ -0.34
TMEM39B-203ENST00000441402 TRAV8-1A0A0A6YYK1 113 aa12.92□□□□□ -0.34
TMEM39B-203ENST00000441402 LINC01619G3V211 115 aa12.92□□□□□ -0.34
TMEM39B-203ENST00000441402 IBA57Q5T440 356 aaKnown RBP12.92□□□□□ -0.34
TMEM39B-203ENST00000441402 KCNIP4Q6PIL6 250 aa12.92□□□□□ -0.34
TMEM39B-203ENST00000441402 ZNF492Q9P255 531 aa12.92□□□□□ -0.34
TMEM39B-203ENST00000441402 TMA7Q9Y2S6 64 aaKnown RBP12.92□□□□□ -0.34
TMEM39B-203ENST00000441402 MTORP42345 2549 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 SOCS3O14543 225 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 CXCL1P09341 107 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 C18orf65Q6ZTR6 163 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 NHLRC2Q8NBF2 726 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 BTF3L4Q96K17 158 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 NRN1Q9NPD7 142 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 IL36BQ9NZH7 164 aa12.91□□□□□ -0.34
TMEM39B-203ENST00000441402 TRAV9-1A0A075B6T8 112 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 TGIF2-C20orf24A0A0A6YYL0 155 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 CRLF1O75462 422 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 HLA-DMBP28068 263 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 SYNJ2BPP57105 145 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 Q71RC1 249 aaPredicted RBP12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 OR1N2Q8NGR9 330 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 RNASE7Q9H1E1 156 aaKnown RBP12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 MLXQ9UH92 298 aa12.9□□□□□ -0.34
TMEM39B-203ENST00000441402 TCF21O43680 179 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 SAPCD1Q5SSQ6 148 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 NUDT10Q8NFP7 164 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 OR11H1Q8NG94 326 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 DPF1Q92782 380 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 NUDT11Q96G61 164 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 FAM210BQ96KR6 192 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 C16orf92Q96LL3 132 aa12.89□□□□□ -0.35
TMEM39B-203ENST00000441402 C19orf71A6NCJ1 209 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 CBLN1P23435 193 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 TCF24Q7RTU0 167 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 KLHL30-AS1Q8NEE0 82 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 C2orf70A6NJV1 201 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 PROK1P58294 105 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 RNF182Q8N6D2 247 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 RNF114Q9Y508 228 aa12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
TMEM39B-203ENST00000441402 GATCO43716 136 aaKnown RBP12.87□□□□□ -0.35
TMEM39B-203ENST00000441402 TYMSP04818 313 aa12.87□□□□□ -0.35
TMEM39B-203ENST00000441402 CD28P10747 220 aa12.87□□□□□ -0.35
TMEM39B-203ENST00000441402 EDN2P20800 178 aa12.87□□□□□ -0.35
TMEM39B-203ENST00000441402 PRR25Q96S07 402 aa12.87□□□□□ -0.35
TMEM39B-203ENST00000441402 SMIM27A0A1W2PRY6 76 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 PRAC2D3DTV9 90 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 NPIPB6E9PJ23 425 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 SLURP1P55000 103 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 FAM3BP58499 235 aaPredicted RBP12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 CT83Q5H943 113 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 KHDC1LQ5JSQ8 128 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 LINC00322Q6ZN03 302 aaPredicted RBP12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 VGLL1Q99990 258 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 SRD5A3Q9H8P0 318 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 PEMTQ9UBM1 199 aa12.86□□□□□ -0.35
TMEM39B-203ENST00000441402 HIVEP1P15822 2718 aa12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 A0A1W2PPQ1 181 aa12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 RPS10P46783 165 aaKnown RBP12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 RPL11P62913 178 aaKnown RBP12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 FHL3Q13643 280 aa12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 PRR27Q6MZM9 219 aa12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 OR4B1Q8NGF8 309 aa12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 DCANP1Q8TF63 244 aa12.85□□□□□ -0.35
TMEM39B-203ENST00000441402 C1orf196B1AJZ1 125 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 M0QZ24 198 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 OVOL1O14753 267 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 ADAMTSL5Q6ZMM2 481 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 OR9G4Q8NGQ1 327 aa12.84□□□□□ -0.35
TMEM39B-203ENST00000441402 DAZAP1Q96EP5 407 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms