RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 SCGB3A1Q96QR1 104 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 HIST1H2BNQ99877 126 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 HIST1H2BMQ99879 126 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 LXNQ9BS40 222 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 CCDC94Q9BW85 323 aaPredicted RBP0.93□□□□□ -2.26
LINC01549-201ENST00000440664 TTTY13Q9BZ97 58 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 WDR61Q9GZS3 305 aaKnown RBP0.93□□□□□ -2.26
LINC01549-201ENST00000440664 CYSTM1Q9H1C7 97 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 VCX3BQ9H321 246 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 PAQR5Q9NXK6 330 aaPredicted RBP0.93□□□□□ -2.26
LINC01549-201ENST00000440664 CKLFQ9UBR5 152 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 COQ4Q9Y3A0 265 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 HEATR5BQ9P2D3 2071 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 PKD1P98161 4303 aa0.93□□□□□ -2.26
LINC01549-201ENST00000440664 NUP210Q8TEM1 1887 aaPredicted RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 MYO18AQ92614 2054 aaKnown RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 DENND4CQ5VZ89 1909 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 FREM1Q5H8C1 2179 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 IGKV2-40A0A087WW87 121 aaPredicted RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 A0A0J9YY10 115 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SPTY2D1-AS1A0A0U1RR47 76 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 A0A1B0GX78 115 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 OR51F1A6NGY5 319 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 H3BT86 120 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 KPNA3O00505 521 aaPredicted RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 NSA2O95478 260 aaKnown RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 IGKV2D-40P01614 121 aaPredicted RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 HLA-DRB1P01911 266 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 C1QCP02747 245 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 PRM2P04554 102 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 REG1AP05451 166 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 RPSAP08865 295 aaKnown RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 RBP1P09455 135 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 TRGC1P0CF51 173 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 PRB4P10163 310 aaPredicted RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 RPL28P46779 137 aaKnown RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 ZNF80P51504 273 aaPredicted RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SNRPD2P62316 118 aaKnown RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 HIST1H3AP68431 136 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 H3F3AP84243 136 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 EIF3IQ13347 325 aaKnown RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 EDDM3AQ14507 147 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SPANXN5Q5MJ07 72 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SAPCD1Q5SSQ6 148 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SYPL2Q5VXT5 272 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SFXN4Q6P4A7 337 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 AAED1Q7RTV5 226 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SLC36A1Q7Z2H8 476 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 OR8J2Q8NGG1 315 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 OR4D11Q8NGI4 311 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 RASSF5Q8WWW0 418 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 BTF3L4Q96K17 158 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 YIPF3Q9GZM5 350 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 MIXL1Q9H2W2 232 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 UCK1Q9HA47 277 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 UBAP1Q9NZ09 502 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 NAT8Q9UHE5 227 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 SLC22A13Q9Y226 551 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 TMEM56-RWDD3S4R434 201 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 LRP1Q07954 4544 aaKnown RBP0.92□□□□□ -2.26
LINC01549-201ENST00000440664 MED12LQ86YW9 2145 aa0.92□□□□□ -2.26
LINC01549-201ENST00000440664 ANAPC1Q9H1A4 1944 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 PLXND1Q9Y4D7 1925 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 TRAV9-1A0A075B6T8 112 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 A0A0D9SEW6 157 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 LCE6AA0A183 80 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 A0A1B0GVG6 124 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 MDFIC2A0A1B0GVS7 189 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 TRAPPC13A5PLN9 417 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 DPRXA6NFQ7 191 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 CLDN24A6NM45 220 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 ZNF705FA8MVS1 300 aaPredicted RBP0.91□□□□□ -2.26
LINC01549-201ENST00000440664 PIRO00625 290 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 ORC5O43913 435 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 PGLYRP1O75594 196 aaPredicted RBP0.91□□□□□ -2.26
LINC01549-201ENST00000440664 OR2B3O76000 313 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 CRYZL1O95825 349 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 TCL1BO95988 128 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 PPBPP02775 128 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 COX6A1P12074 109 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 GPX2P18283 190 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 HIST1H1TP22492 207 aaPredicted RBP0.91□□□□□ -2.26
LINC01549-201ENST00000440664 CDKN2CP42773 168 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 REG1BP48304 166 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 YPEL3P61236 119 aaPredicted RBP0.91□□□□□ -2.26
LINC01549-201ENST00000440664 CDK10Q15131 360 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 ACOT6Q3I5F7 207 aaPredicted RBP0.91□□□□□ -2.26
LINC01549-201ENST00000440664 ZNF791Q3KP31 576 aaPredicted RBP0.91□□□□□ -2.26
LINC01549-201ENST00000440664 KRTAP13-4Q3LI77 160 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 C8orf74Q6P047 294 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 C7orf65Q6ZTY9 151 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 TRAPPC6BQ86SZ2 158 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 KRT222Q8N1A0 295 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 CLDN22Q8N7P3 220 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 NAT14Q8WUY8 206 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 ITFG2Q969R8 447 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 TOMM6Q96B49 74 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 CCL19Q99731 98 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 GINS4Q9BRT9 223 aa0.91□□□□□ -2.26
LINC01549-201ENST00000440664 DDA1Q9BW61 102 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms