RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
TNFRSF1A-204ENST00000440083 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
TNFRSF1A-204ENST00000440083 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 ZNF785A8K8V0 405 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 K7EN84 100 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 PF4P02776 101 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 CSN1S1P47710 185 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 ERVFC1-1P60608 527 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 C1orf194Q5T5A4 169 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 BAGE2Q86Y30 109 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
TNFRSF1A-204ENST00000440083 TRAV34A0A0B4J273 112 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 ISLRO14498 428 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 ZNF207O43670 478 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 GGCTO75223 188 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 ZNF253O75346 499 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 CXCL1P09341 107 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 RPS10P46783 165 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 FLI1Q01543 452 aaPredicted RBP11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 GOLT1AQ6ZVE7 132 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 LINC00482Q8N8I6 264 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 SMIM12Q96EX1 92 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 GRAMD2BQ96HH9 432 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 FAM210BQ96KR6 192 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 BIN3Q9NQY0 253 aa11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 PEF1Q9UBV8 284 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-204ENST00000440083 MEGF8Q7Z7M0 2845 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 A0A087X0K7 114 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 SERTM2A0A1B0GWG4 89 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 CCL24O00175 119 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 SLC17A3O00476 420 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 BUB3O43684 328 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 GCGP01275 180 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 C17orf77Q96MU5 243 aa11.09□□□□□ -0.63
TNFRSF1A-204ENST00000440083 TRBV24-1A0A075B6N3 115 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 PFN1P07737 140 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 MEOX2P50222 304 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 OR5I1Q13606 314 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 Q86TA4 180 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 C1QL4Q86Z23 238 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 TMEM75Q8N9X5 138 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 NHLRC2Q8NBF2 726 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 OR11H1Q8NG94 326 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 KLF12Q9Y4X4 402 aa11.08□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IGHV4OR15-8A0A075B7B6 117 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 A0A087WW49 117 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 A0A1W2PS18 150 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IGLV2-8P01709 118 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 FHL3Q13643 280 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IBA57Q5T440 356 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 OR1N2Q8NGR9 330 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IGHV3OR16-13A0A075B7E8 117 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IGHV3-74A0A0B4J1X5 117 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 IGLL1P15814 213 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 CD33P20138 364 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 SLURP1P55000 103 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 FAM106AQ4KMX7 169 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 PRR27Q6MZM9 219 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 PRNTQ86SH4 94 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 ZFP82Q8N141 532 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 ARL6IP6Q8N6S5 226 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 SGK494Q96LW2 274 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 SMAD5-AS1Q9Y6J3 95 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 U3KQE9 123 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 DNAH3Q8TD57 4116 aa11.06□□□□□ -0.64
TNFRSF1A-204ENST00000440083 TRAV9-1A0A075B6T8 112 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 FBLL1A6NHQ2 334 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 ZNF705GA8MUZ8 300 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 DIRC3C9JPN6 131 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 G3V4G9 280 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 LTAP01374 205 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 BMI1P35226 326 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 RPL19P84098 196 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 PSG3Q16557 428 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 C16orf54Q6UWD8 224 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 FAM231DQ6ZW35 169 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 V9GYV3 84 aa11.05□□□□□ -0.64
TNFRSF1A-204ENST00000440083 LINC01619G3V211 115 aa11.04□□□□□ -0.64
TNFRSF1A-204ENST00000440083 M0R3E3 92 aa11.04□□□□□ -0.64
TNFRSF1A-204ENST00000440083 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms