RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 LTAP01374 205 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 CGB3P0DN86 165 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 CGB7P0DN87 165 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 BCL6BQ8N143 479 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 ARPC1AQ92747 370 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 FXYD5Q96DB9 178 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 ZNF414Q96IQ9 312 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 HIF1ANQ9NWT6 349 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGKV2-40A0A087WW87 121 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 A0A1B0GUT8 65 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 NPIPB5A8MRT5 1133 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGKV2D-40P01614 121 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGHV1-8P0DP01 117 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 LOXP28300 417 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 AZU1P20160 251 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 ARL3P36405 182 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 ATP5G2Q06055 141 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 COX19Q49B96 90 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 ZNF418Q8TF45 676 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 SMIM12Q96EX1 92 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 PRELID3AQ96N28 172 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 MSRB1Q9NZV6 116 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 NOTCH2Q04721 2471 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 H3BMG7 143 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 H7C2G1 150 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 CD5LO43866 347 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 TCRAP04437 139 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 ANXA2RQ3ZCQ2 193 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 TMEM133Q9H2Q1 129 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 SCRT2Q9NQ03 307 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 JKAMPQ9P055 326 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 C22orf46C9J442 243 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 NDUFS7O75251 213 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 GAS8-AS1O95177 125 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGLC1P0CG04 106 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 RASL11BQ9BPW5 248 aa7.9□□□□□ -1.14
CDC42SE1-202ENST00000439374 H3BVH4 76 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 TIMM23O14925 209 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 NDUFA3O95167 84 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 GATA4P43694 442 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 EMP1P54849 157 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 PAX2Q02962 417 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 LY6DQ14210 128 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 WFDC2Q14508 124 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 SAMD5Q5TGI4 173 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 LYZL1Q6UWQ5 148 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 Q8NA96 180 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 FOXC2Q99958 501 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 NDUFA4L2Q9NRX3 87 aa7.9□□□□□ -1.15
CDC42SE1-202ENST00000439374 LOC107984156A0A0G2JMH3 177 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 CEACAM4O75871 244 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 IL4P05112 153 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 HLA-DMBP28068 263 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 APOBEC3AP31941 199 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 FXYD2P54710 66 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 C2orf83Q53S99 150 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 IGFL3Q6UXB1 125 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 ADAMTSL5Q6ZMM2 481 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 MRPL52Q86TS9 123 aaKnown RBP7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 ARL17AQ8IVW1 177 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 TCRBV4S1A1TA0A5B7 111 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 FCN3O75636 299 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 HIGD1AQ9Y241 93 aa7.89□□□□□ -1.15
CDC42SE1-202ENST00000439374 PPP1R27Q86WC6 154 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 FAM90A9PA6NNJ1 464 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 C2orf91Q6ZV80 131 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 RIGQ13278 110 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 ZNF672Q499Z4 452 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 OR5AN1Q8NGI8 311 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 UBTD1Q9HAC8 227 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 LINC00527Q9UJ94 153 aa7.88□□□□□ -1.15
CDC42SE1-202ENST00000439374 MC5RP33032 325 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 INSL3P51460 131 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 ECSCRQ19T08 205 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 FAM71F2Q6NXP2 309 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 ZNF833PQ6ZTB9 187 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 TIMD4Q96H15 378 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 ZNF747Q9BV97 191 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 LRRK2Q5S007 2527 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 FNDC10F2Z333 226 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 COX8AP10176 69 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 SIGLEC8Q9NYZ4 499 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 LY96Q9Y6Y9 160 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 IGHV1-3A0A0C4DH29 117 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 SHISA9B4DS77 424 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 LEPP41159 167 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 TMEM167AQ8TBQ9 72 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 IFI27L1Q96BM0 104 aa7.87□□□□□ -1.15
CDC42SE1-202ENST00000439374 IGKV2D-26A0A0A0MRZ7 120 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 TMEM189A5PLL7 270 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 NPYP01303 97 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 CDSNQ15517 529 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 TEX36Q5VZQ5 186 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 PET117Q6UWS5 81 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 NUP37Q8NFH4 326 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 HIST1H4GQ99525 98 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 C19orf24Q9BVV8 132 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms