RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 F6UZH7 168 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 PDE6DO43924 150 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 SLC25A5P05141 298 aaKnown RBP9.45□□□□□ -0.9
SCLT1-202ENST00000439369 UBE2G2P60604 165 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 PSMG4Q5JS54 123 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 FAM24BQ8N5W8 94 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 RPUSD4Q96CM3 377 aaKnown RBP9.45□□□□□ -0.9
SCLT1-202ENST00000439369 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 EPDR1Q9UM22 224 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 RAB19A4D1S5 217 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 G3V4G9 280 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 DEFB131AP59861 70 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 CD81P60033 236 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 HAGHQ16775 308 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 PCNPQ8WW12 178 aaKnown RBP9.44□□□□□ -0.9
SCLT1-202ENST00000439369 C11orf52Q96A22 123 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 C20orf173Q96LM9 149 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 ATG101Q9BSB4 218 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 C19orf73Q9NVV2 129 aa9.44□□□□□ -0.9
SCLT1-202ENST00000439369 LINC00862A6NCI5 91 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 DIRC3C9JPN6 131 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 K7EQM0 130 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 M0R3E3 92 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 DUSP14O95147 198 aaKnown RBP9.43□□□□□ -0.9
SCLT1-202ENST00000439369 TCRAP04437 139 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 HLA-DMBP28068 263 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 ATP5G3P48201 142 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 IGFL4Q6B9Z1 124 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 EBLN2Q6P2I7 272 aa9.43□□□□□ -0.9
SCLT1-202ENST00000439369 EIF5A2Q9GZV4 153 aaKnown RBP9.43□□□□□ -0.9
SCLT1-202ENST00000439369 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
SCLT1-202ENST00000439369 A0A0J9YX75 114 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 A8MTW9 85 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 PEX7O00628 323 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 S100A9P06702 114 aaKnown RBP9.42□□□□□ -0.9
SCLT1-202ENST00000439369 CD7P09564 240 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 PEA15Q15121 130 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 CYB561D1Q8N8Q1 229 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 OR8A1Q8NGG7 326 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 ANK2Q01484 3957 aa9.42□□□□□ -0.9
SCLT1-202ENST00000439369 NPIPB6E9PJ23 425 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 UQCC3Q6UW78 93 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 Q8N1Y9 231 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 EIF4E3Q8N5X7 224 aaKnown RBP9.41□□□□□ -0.9
SCLT1-202ENST00000439369 LINC00477Q96M19 166 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 ODF3Q96PU9 254 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 LENEPQ9Y5L5 61 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
SCLT1-202ENST00000439369 TRBV7-9A0A0J9YWB2 115 aa9.4□□□□□ -0.9
SCLT1-202ENST00000439369 TRBV6-1A0A0K0K1D8 114 aa9.4□□□□□ -0.9
SCLT1-202ENST00000439369 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
SCLT1-202ENST00000439369 GOLT1AQ6ZVE7 132 aa9.4□□□□□ -0.9
SCLT1-202ENST00000439369 TMEM75Q8N9X5 138 aa9.4□□□□□ -0.9
SCLT1-202ENST00000439369 C2CD4CQ8TF44 421 aa9.4□□□□□ -0.9
SCLT1-202ENST00000439369 FMC1Q96HJ9 113 aa9.4□□□□□ -0.9
SCLT1-202ENST00000439369 RARRES2Q99969 163 aa9.4□□□□□ -0.9
SCLT1-202ENST00000439369 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 A8MZ25 164 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 PRAC2D3DTV9 90 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 H3BMM0 161 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 CNN1P51911 297 aaKnown RBP9.39□□□□□ -0.91
SCLT1-202ENST00000439369 GNG5P63218 68 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 TMEM78Q5T7P6 136 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 APRG1Q8IVJ8 170 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 PRR25Q96S07 402 aa9.39□□□□□ -0.91
SCLT1-202ENST00000439369 NOTCH3Q9UM47 2321 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
SCLT1-202ENST00000439369 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
SCLT1-202ENST00000439369 AKR1C3P42330 323 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 ZNF138P52744 262 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 TAS2R60P59551 318 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
SCLT1-202ENST00000439369 NDUFA5Q16718 116 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 TMEM183BQ1AE95 376 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
SCLT1-202ENST00000439369 STHQ8IWL8 128 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 SLC35B3Q9H1N7 401 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 RPH3ALQ9UNE2 315 aa9.38□□□□□ -0.91
SCLT1-202ENST00000439369 KNCNA6PVL3 124 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 F6UB75 175 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 AMBPP02760 352 aa9.37□□□□□ -0.91
SCLT1-202ENST00000439369 SRP19P09132 144 aaKnown RBP9.37□□□□□ -0.91
SCLT1-202ENST00000439369 NUTF2P61970 127 aaKnown RBP9.37□□□□□ -0.91
SCLT1-202ENST00000439369 UBE2G1P62253 170 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms