RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 SH2D1AO60880 128 aa9.8□□□□□ -0.84
TCOF1-205ENST00000439160 SAP30O75446 220 aa9.8□□□□□ -0.84
TCOF1-205ENST00000439160 ATP5L2Q7Z4Y8 100 aa9.8□□□□□ -0.84
TCOF1-205ENST00000439160 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
TCOF1-205ENST00000439160 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 IGLC1P0CG04 106 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 IGLC7A0M8Q6 106 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 OR11H12B2RN74 326 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 H7C2G1 150 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 K7ERU9 68 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 SSBP2P81877 361 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-205ENST00000439160 OR10J3Q5JRS4 329 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 Q86TA4 180 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 OR11H1Q8NG94 326 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 OR11H2Q8NH07 326 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 TRAV12-3A0A0B4J271 114 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 F2Z2F3 143 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 CRXO43186 299 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-205ENST00000439160 ATP5LO75964 103 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 GUSBP1Q15486 140 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 SLC25A2Q9BXI2 301 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 LAMTOR2Q9Y2Q5 125 aa9.79□□□□□ -0.84
TCOF1-205ENST00000439160 J3QKU1 62 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 ACTL10Q5JWF8 245 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 CDPF1Q6NVV7 123 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 JMJD1CQ15652 2540 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 SNCGO76070 127 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 FXYD7P58549 80 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PAPPA-AS1Q5QFB9 102 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 DNLZQ5SXM8 178 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 CRIP3Q6Q6R5 217 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 RITA1Q96K30 269 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 D6R8Y8 96 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
TCOF1-205ENST00000439160 RPL13AP40429 203 aaKnown RBP9.78□□□□□ -0.84
TCOF1-205ENST00000439160 ZNF114Q8NC26 417 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 CHD3Q12873 2000 aaKnown RBP9.78□□□□□ -0.84
TCOF1-205ENST00000439160 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PPBPP02775 128 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 HTN3P15516 51 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PRR20EP86478 221 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PRR20CP86479 221 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PRR20DP86480 221 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PRR20BP86481 221 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PRR20AP86496 221 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 PDE6HQ13956 83 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 LYRM7Q5U5X0 104 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 C5orf30Q96GV9 206 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 JKAMPQ9P055 326 aa9.78□□□□□ -0.84
TCOF1-205ENST00000439160 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.84
TCOF1-205ENST00000439160 TMEM262E9PQX1 116 aa9.77□□□□□ -0.84
TCOF1-205ENST00000439160 IGHV4-39P01824 125 aa9.77□□□□□ -0.84
TCOF1-205ENST00000439160 Q6ZPA2 131 aa9.77□□□□□ -0.84
TCOF1-205ENST00000439160 C1orf122Q6ZSJ8 110 aa9.77□□□□□ -0.85
TCOF1-205ENST00000439160 IL17RELQ6ZVW7 336 aa9.77□□□□□ -0.85
TCOF1-205ENST00000439160 IGHV4-30-2A0A087WSY4 118 aa9.77□□□□□ -0.85
TCOF1-205ENST00000439160 HOXB4P17483 251 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-205ENST00000439160 ASPHD1Q5U4P2 390 aa9.77□□□□□ -0.85
TCOF1-205ENST00000439160 C8orf31Q8N9H6 132 aa9.77□□□□□ -0.85
TCOF1-205ENST00000439160 HBDP02042 147 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 PFN1P07737 140 aaKnown RBP9.76□□□□□ -0.85
TCOF1-205ENST00000439160 SUMO2P61956 95 aaKnown RBP9.76□□□□□ -0.85
TCOF1-205ENST00000439160 ST20Q9HBF5 79 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 IGLV2-14P01704 120 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 EREGO14944 169 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 LURAP1LQ8IV03 231 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 OR11H6Q8NGC7 330 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 TMEM249Q2WGJ8 235 aa9.76□□□□□ -0.85
TCOF1-205ENST00000439160 NXT2Q9NPJ8 142 aaKnown RBP9.76□□□□□ -0.85
TCOF1-205ENST00000439160 NDUFA3O95167 84 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 Q71RC1 249 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-205ENST00000439160 CACNG7P62955 275 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 C1orf194Q5T5A4 169 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 HTTP42858 3142 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 CHD7Q9P2D1 2997 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 NCKAP5O14513 1909 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 LRRK2Q5S007 2527 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 AMN1Q8IY45 258 aa9.75□□□□□ -0.85
TCOF1-205ENST00000439160 ZNF491Q8N8L2 437 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 DSCAMO60469 2012 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 ABCA12Q86UK0 2595 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 IGHV3-73A0A0B4J1V6 119 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 TMEM238LA0A1B0GVL6 79 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 A6NJY4 79 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 FBXL19-AS1Q494R0 122 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 C14orf178Q8N769 122 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-205ENST00000439160 LSM4Q9Y4Z0 139 aaKnown RBP9.74□□□□□ -0.85
TCOF1-205ENST00000439160 IGHV4-59P01825 116 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 THAP8Q8NA92 274 aa9.74□□□□□ -0.85
TCOF1-205ENST00000439160 A8MWP6 167 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 SMKR1H3BMG3 65 aa9.73□□□□□ -0.85
TCOF1-205ENST00000439160 DEFB131AP59861 70 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms