RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 SH3BGRL3Q9H299 93 aa13.1□□□□□ -0.31
UBXN1-203ENST00000436354 SEPSECSQ9HD40 501 aaKnown RBP13.1□□□□□ -0.31
UBXN1-203ENST00000436354 DNAJC4Q9NNZ3 241 aa13.1□□□□□ -0.31
UBXN1-203ENST00000436354 PLA2G2EQ9NZK7 142 aa13.1□□□□□ -0.31
UBXN1-203ENST00000436354 SMIM9A6NGZ8 99 aa13.09□□□□□ -0.31
UBXN1-203ENST00000436354 ZNF98A6NK75 572 aa13.09□□□□□ -0.31
UBXN1-203ENST00000436354 H3BMM0 161 aa13.09□□□□□ -0.31
UBXN1-203ENST00000436354 EIF5AP63241 154 aaKnown RBP13.09□□□□□ -0.31
UBXN1-203ENST00000436354 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
UBXN1-203ENST00000436354 C10orf113Q5VZT2 155 aa13.09□□□□□ -0.31
UBXN1-203ENST00000436354 ZNF705AQ6ZN79 300 aaPredicted RBP13.09□□□□□ -0.31
UBXN1-203ENST00000436354 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
UBXN1-203ENST00000436354 UHRF2Q96PU4 802 aa13.09□□□□□ -0.31
UBXN1-203ENST00000436354 DNAH11Q96DT5 4516 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 BOLA2-SMG1P6H3BVE0 249 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 M6PRP20645 277 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 EMP1P54849 157 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 C1orf134Q5TEV5 83 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 LINC00305Q7Z4B0 112 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 BAP18Q8IXM2 172 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 PPP1R14BQ96C90 147 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 SLC25A32Q9H2D1 315 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 RNF24Q9Y225 148 aa13.08□□□□□ -0.32
UBXN1-203ENST00000436354 DYNC1H1Q14204 4646 aaKnown RBP13.08□□□□□ -0.32
UBXN1-203ENST00000436354 TEX48A0A1B0GUV7 120 aa13.07□□□□□ -0.32
UBXN1-203ENST00000436354 ZNF705FA8MVS1 300 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-203ENST00000436354 SEC11BP0C7V7 166 aa13.07□□□□□ -0.32
UBXN1-203ENST00000436354 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-203ENST00000436354 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-203ENST00000436354 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
UBXN1-203ENST00000436354 ACOT6Q3I5F7 207 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-203ENST00000436354 MORN5Q5VZ52 161 aa13.07□□□□□ -0.32
UBXN1-203ENST00000436354 MRPL32Q9BYC8 188 aaKnown RBP13.07□□□□□ -0.32
UBXN1-203ENST00000436354 NRN1Q9NPD7 142 aa13.07□□□□□ -0.32
UBXN1-203ENST00000436354 MBP02144 154 aa13.06□□□□□ -0.32
UBXN1-203ENST00000436354 HLA-DRB4P13762 266 aa13.06□□□□□ -0.32
UBXN1-203ENST00000436354 GPR82Q96P67 336 aa13.06□□□□□ -0.32
UBXN1-203ENST00000436354 HLA-DRB4X5D2U9 266 aa13.06□□□□□ -0.32
UBXN1-203ENST00000436354 ABCA13Q86UQ4 5058 aa13.05□□□□□ -0.32
UBXN1-203ENST00000436354 MRPS12O15235 138 aaKnown RBP13.05□□□□□ -0.32
UBXN1-203ENST00000436354 RAB2AP61019 212 aa13.05□□□□□ -0.32
UBXN1-203ENST00000436354 FAM78BQ5VT40 261 aa13.05□□□□□ -0.32
UBXN1-203ENST00000436354 NIPSNAP3BQ9BS92 247 aa13.05□□□□□ -0.32
UBXN1-203ENST00000436354 DKK2Q9UBU2 259 aa13.05□□□□□ -0.32
UBXN1-203ENST00000436354 FUT9Q9Y231 359 aa13.05□□□□□ -0.32
UBXN1-203ENST00000436354 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
UBXN1-203ENST00000436354 RHOBP62745 196 aa13.04□□□□□ -0.32
UBXN1-203ENST00000436354 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
UBXN1-203ENST00000436354 OR8I2Q8N0Y5 310 aa13.04□□□□□ -0.32
UBXN1-203ENST00000436354 CDK2AP2O75956 126 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 HTN3P15516 51 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
UBXN1-203ENST00000436354 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 SPATA31B1PQ5VZV4 182 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 OR10G4Q8NGN3 311 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 OR10G9Q8NGN4 311 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 OR10G7Q8NGN6 311 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 SLC25A22Q9H936 323 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 NACAE9PAV3 2078 aa13.03□□□□□ -0.32
UBXN1-203ENST00000436354 A0A087X0K7 114 aa13.02□□□□□ -0.33
UBXN1-203ENST00000436354 C16orf90A8MZG2 172 aa13.02□□□□□ -0.33
UBXN1-203ENST00000436354 GALR1P47211 349 aa13.02□□□□□ -0.33
UBXN1-203ENST00000436354 MIR17HGQ75NE6 70 aa13.02□□□□□ -0.33
UBXN1-203ENST00000436354 C17orf77Q96MU5 243 aa13.02□□□□□ -0.33
UBXN1-203ENST00000436354 SLC25A2Q9BXI2 301 aa13.02□□□□□ -0.33
UBXN1-203ENST00000436354 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
UBXN1-203ENST00000436354 TRAV5A0A0B4J249 113 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 UMAD1C9J7I0 102 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 FAM3BP58499 235 aaPredicted RBP13.01□□□□□ -0.33
UBXN1-203ENST00000436354 FXYD7P58549 80 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 AKR1C8PQ5T2L2 129 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 EIF5AL1Q6IS14 154 aaKnown RBP13.01□□□□□ -0.33
UBXN1-203ENST00000436354 BPIFA4PQ86YQ2 179 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 PHYHIPLQ96FC7 376 aa13.01□□□□□ -0.33
UBXN1-203ENST00000436354 IGLC2P0DOY2 106 aa13□□□□□ -0.33
UBXN1-203ENST00000436354 CDC34P49427 236 aaPredicted RBP13□□□□□ -0.33
UBXN1-203ENST00000436354 KHDC3LQ587J8 217 aa13□□□□□ -0.33
UBXN1-203ENST00000436354 GDF5OSQ5U4N7 250 aa13□□□□□ -0.33
UBXN1-203ENST00000436354 CLUHP3Q96NS8 147 aa13□□□□□ -0.33
UBXN1-203ENST00000436354 A0A1W2PPV4 95 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 SOCS3O14543 225 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 MEOX2P50222 304 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 TAS2R45P59539 299 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 ZNF726P1Q15940 193 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 FAM122CQ6P4D5 195 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 TMEM88Q6PEY1 159 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 ZNF503Q96F45 646 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 ACTR3CQ9C0K3 210 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-203ENST00000436354 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-203ENST00000436354 GOLT1BQ9Y3E0 138 aa12.99□□□□□ -0.33
UBXN1-203ENST00000436354 CTXND1A0A1B0GTU2 59 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms