RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 GNG5P63218 68 aa17.27■□□□□ 0.36
CPSF4-204ENST00000436336 RNF182Q8N6D2 247 aa17.27■□□□□ 0.36
CPSF4-204ENST00000436336 MDFIQ99750 246 aa17.27■□□□□ 0.36
CPSF4-204ENST00000436336 STAB1Q9NY15 2570 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 PEX7O00628 323 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 TCRAP04437 139 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 CEBPGP53567 150 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 RIPPLY3P57055 190 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 PSG3Q16557 428 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 C9orf66Q5T8R8 295 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 SPATA3Q8NHX4 192 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 SPAG8Q99932 426 aaPredicted RBP17.27■□□□□ 0.35
CPSF4-204ENST00000436336 ATG101Q9BSB4 218 aa17.27■□□□□ 0.35
CPSF4-204ENST00000436336 MCRIP2Q9BUT9 160 aaKnown RBP17.27■□□□□ 0.35
CPSF4-204ENST00000436336 RPUSD4Q96CM3 377 aaKnown RBP17.26■□□□□ 0.35
CPSF4-204ENST00000436336 RPH3ALQ9UNE2 315 aa17.26■□□□□ 0.35
CPSF4-204ENST00000436336 LCN12Q6JVE5 192 aa17.25■□□□□ 0.35
CPSF4-204ENST00000436336 IZUMO1RA6ND01 250 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 DIRC3C9JPN6 131 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 SNRPD3P62318 126 aaKnown RBP17.24■□□□□ 0.35
CPSF4-204ENST00000436336 C2CD4CQ8TF44 421 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 C20orf173Q96LM9 149 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 OR4C46A6NHA9 309 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 AKR1C3P42330 323 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 SOHLH1Q5JUK2 328 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 PARLQ9H300 379 aa17.24■□□□□ 0.35
CPSF4-204ENST00000436336 SERTM2A0A1B0GWG4 89 aa17.23■□□□□ 0.35
CPSF4-204ENST00000436336 ZNF705FA8MVS1 300 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-204ENST00000436336 FAM24BQ8N5W8 94 aa17.23■□□□□ 0.35
CPSF4-204ENST00000436336 LINC00052Q96N35 136 aa17.23■□□□□ 0.35
CPSF4-204ENST00000436336 KRBOX1C9JBD0 128 aa17.22■□□□□ 0.35
CPSF4-204ENST00000436336 K7EQM0 130 aa17.22■□□□□ 0.35
CPSF4-204ENST00000436336 CNN1P51911 297 aaKnown RBP17.22■□□□□ 0.35
CPSF4-204ENST00000436336 GOLT1AQ6ZVE7 132 aa17.22■□□□□ 0.35
CPSF4-204ENST00000436336 ZNF738Q8NE65 137 aa17.22■□□□□ 0.35
CPSF4-204ENST00000436336 F8W036 122 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 ATP6V1G1O75348 118 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 GUCA2BQ16661 112 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 DERL1Q9BUN8 251 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 SEC11CQ9BY50 192 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 ZNF256Q9Y2P7 627 aaPredicted RBP17.21■□□□□ 0.35
CPSF4-204ENST00000436336 ZNF688P0C7X2 276 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 ADCYAP1P18509 176 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 ZNF674Q2M3X9 581 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 FAM74A3Q4VXF1 159 aa17.21■□□□□ 0.35
CPSF4-204ENST00000436336 VWFP04275 2813 aa17.2■□□□□ 0.34
CPSF4-204ENST00000436336 ZNF727A8MUV8 499 aa17.2■□□□□ 0.34
CPSF4-204ENST00000436336 RPL35P42766 123 aaKnown RBP17.2■□□□□ 0.34
CPSF4-204ENST00000436336 LINC00479Q96M42 142 aa17.2■□□□□ 0.34
CPSF4-204ENST00000436336 KLF12Q9Y4X4 402 aa17.2■□□□□ 0.34
CPSF4-204ENST00000436336 RBAKDNA6NC62 111 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 PRAC2D3DTV9 90 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 S100A9P06702 114 aaKnown RBP17.19■□□□□ 0.34
CPSF4-204ENST00000436336 UBE2G1P62253 170 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 TMEM183BQ1AE95 376 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 PSMG4Q5JS54 123 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 TMEM75Q8N9X5 138 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 FMC1Q96HJ9 113 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 SMIM7Q9BQ49 75 aa17.19■□□□□ 0.34
CPSF4-204ENST00000436336 TAS2R60P59551 318 aa17.18■□□□□ 0.34
CPSF4-204ENST00000436336 C10orf91Q5T1B1 145 aa17.18■□□□□ 0.34
CPSF4-204ENST00000436336 IGKV2-40A0A087WW87 121 aaPredicted RBP17.18■□□□□ 0.34
CPSF4-204ENST00000436336 IGKV2D-40P01614 121 aaPredicted RBP17.18■□□□□ 0.34
CPSF4-204ENST00000436336 PRB4P10163 310 aaPredicted RBP17.18■□□□□ 0.34
CPSF4-204ENST00000436336 TRAV34A0A0B4J273 112 aa17.17■□□□□ 0.34
CPSF4-204ENST00000436336 FBLL1A6NHQ2 334 aaKnown RBP17.17■□□□□ 0.34
CPSF4-204ENST00000436336 IGLL1P15814 213 aa17.17■□□□□ 0.34
CPSF4-204ENST00000436336 WIPF1O43516 503 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 SGK494Q96LW2 274 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 CARHSP1Q9Y2V2 147 aaKnown RBP17.16■□□□□ 0.34
CPSF4-204ENST00000436336 TRAV8-1A0A0A6YYK1 113 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 TRBV6-1A0A0K0K1D8 114 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 C9JCJ5 164 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 IGLV2-11P01706 119 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 BEAN1Q3B7T3 259 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 NIPSNAP3BQ9BS92 247 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 GPR61Q9BZJ8 451 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 MAP6D1Q9H9H5 199 aa17.16■□□□□ 0.34
CPSF4-204ENST00000436336 SORL1Q92673 2214 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 CMC4P56277 68 aaPredicted RBP17.15■□□□□ 0.34
CPSF4-204ENST00000436336 DEFB131AP59861 70 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 FLI1Q01543 452 aaPredicted RBP17.15■□□□□ 0.34
CPSF4-204ENST00000436336 PRR31Q5SQ13 230 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 OR8A1Q8NGG7 326 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 OR10J6PQ8NGY7 276 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 IGF2BP2-AS1Q96M15 143 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 VGLL1Q99990 258 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 PSG8Q9UQ74 426 aa17.15■□□□□ 0.34
CPSF4-204ENST00000436336 TRRAPQ9Y4A5 3859 aa17.14■□□□□ 0.33
CPSF4-204ENST00000436336 TRBV20OR9-2A0A075B6H5 130 aa17.14■□□□□ 0.33
CPSF4-204ENST00000436336 GNG4P50150 75 aa17.14■□□□□ 0.33
CPSF4-204ENST00000436336 CENPWQ5EE01 88 aa17.14■□□□□ 0.33
CPSF4-204ENST00000436336 C9orf47Q6ZRZ4 202 aa17.14■□□□□ 0.33
CPSF4-204ENST00000436336 NAT8Q9UHE5 227 aa17.14■□□□□ 0.33
CPSF4-204ENST00000436336 F6UB75 175 aa17.13■□□□□ 0.33
CPSF4-204ENST00000436336 S100A1P23297 94 aa17.13■□□□□ 0.33
CPSF4-204ENST00000436336 DEFB1P60022 68 aa17.13■□□□□ 0.33
CPSF4-204ENST00000436336 TMEM241Q24JQ0 296 aa17.13■□□□□ 0.33
CPSF4-204ENST00000436336 Q86TA4 180 aa17.13■□□□□ 0.33
CPSF4-204ENST00000436336 PRNTQ86SH4 94 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 228.2 ms