RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 SCGB1D2O95969 90 aa12.88□□□□□ -0.35
AC004540.1-202ENST00000430548 RLN2P04090 185 aa12.88□□□□□ -0.35
AC004540.1-202ENST00000430548 OR5I1Q13606 314 aa12.88□□□□□ -0.35
AC004540.1-202ENST00000430548 BAK1Q16611 211 aa12.88□□□□□ -0.35
AC004540.1-202ENST00000430548 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
AC004540.1-202ENST00000430548 RBM38Q9H0Z9 239 aaKnown RBP12.88□□□□□ -0.35
AC004540.1-202ENST00000430548 LINC00854A0A1B0GVQ3 168 aa12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 C7orf66A4D0T2 115 aa12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 NPIPB6E9PJ23 425 aa12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 COX7A2P2O60397 106 aa12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 SNRPCP09234 159 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 ESRGQ1W209 222 aa12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 MITD1Q8WV92 249 aa12.87□□□□□ -0.35
AC004540.1-202ENST00000430548 A0A0J9YY99 117 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 H3BQ15 152 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 H3BTX0 84 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 GAGE7O76087 117 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 MBPP02686 304 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 C10orf113Q5VZT2 155 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 C18orf15Q96N68 181 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 SDHCQ99643 169 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
AC004540.1-202ENST00000430548 ZNF253O75346 499 aa12.85□□□□□ -0.35
AC004540.1-202ENST00000430548 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
AC004540.1-202ENST00000430548 LEPP41159 167 aa12.85□□□□□ -0.35
AC004540.1-202ENST00000430548 KRTAP10-2P60368 255 aa12.85□□□□□ -0.35
AC004540.1-202ENST00000430548 GUK1Q16774 197 aa12.85□□□□□ -0.35
AC004540.1-202ENST00000430548 TRIQKQ629K1 86 aa12.85□□□□□ -0.35
AC004540.1-202ENST00000430548 Q6ZTI0 123 aa12.84□□□□□ -0.35
AC004540.1-202ENST00000430548 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
AC004540.1-202ENST00000430548 ZNF431Q8TF32 576 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-202ENST00000430548 TRAV12-3A0A0B4J271 114 aa12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 CAMLGP49069 296 aa12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 INPP1P49441 399 aa12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 Q6ZRN7 208 aaPredicted RBP12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 VSIG2Q96IQ7 327 aa12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 GSKIPQ9P0R6 139 aa12.83□□□□□ -0.36
AC004540.1-202ENST00000430548 A0A096LPF7 62 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 VWC2Q2TAL6 325 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 NRARPQ7Z6K4 114 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 ZNF680Q8NEM1 530 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 WDR83OSQ9Y284 106 aa12.82□□□□□ -0.36
AC004540.1-202ENST00000430548 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 KLLNB2CW77 178 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 J3KRW8 73 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 CNPY1Q3B7I2 92 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 OR1L4Q8NGR5 311 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 PFDN5Q99471 154 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 SCRT2Q9NQ03 307 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 ZNF586Q9NXT0 402 aa12.81□□□□□ -0.36
AC004540.1-202ENST00000430548 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 C7orf71A4D174 169 aa12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 CENPXA8MT69 81 aa12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 CCSO14618 274 aa12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 LINC00315P59091 139 aa12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 Q6ZRG5 221 aa12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 C20orf85Q9H1P6 137 aa12.8□□□□□ -0.36
AC004540.1-202ENST00000430548 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
AC004540.1-202ENST00000430548 IL7P13232 177 aa12.79□□□□□ -0.36
AC004540.1-202ENST00000430548 RAB31Q13636 194 aa12.79□□□□□ -0.36
AC004540.1-202ENST00000430548 ANXA2RQ3ZCQ2 193 aa12.79□□□□□ -0.36
AC004540.1-202ENST00000430548 CHAC2Q8WUX2 184 aa12.79□□□□□ -0.36
AC004540.1-202ENST00000430548 UQCC1Q9NVA1 299 aa12.79□□□□□ -0.36
AC004540.1-202ENST00000430548 L7N2F9 121 aa12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 M0R3E3 92 aa12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 ZNF324O75467 553 aaPredicted RBP12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 RPL29P47914 159 aaKnown RBP12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 VAMP2P63027 116 aa12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 PDE6HQ13956 83 aa12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 SLC39A9Q9NUM3 307 aa12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 TMEM14CQ9P0S9 112 aa12.78□□□□□ -0.36
AC004540.1-202ENST00000430548 SPINK4O60575 86 aa12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 CST7O76096 145 aa12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 NDUFB4O95168 129 aa12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 CRISP2P16562 243 aa12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 CAV2P51636 162 aa12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 TCL1AP56279 114 aa12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 EIF4E3Q8N5X7 224 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-202ENST00000430548 HERC1Q15751 4861 aa12.76□□□□□ -0.37
AC004540.1-202ENST00000430548 TRGV2A0A075B6R0 118 aa12.76□□□□□ -0.37
AC004540.1-202ENST00000430548 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
AC004540.1-202ENST00000430548 CD300CQ08708 224 aa12.76□□□□□ -0.37
AC004540.1-202ENST00000430548 ERCC8Q13216 396 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms