RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 C5orf17Q8NAS9 161 aa12.75□□□□□ -0.37
LINC00887-203ENST00000429578 M0R3E3 92 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
LINC00887-203ENST00000429578 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 CD81P60033 236 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 RXFP4Q8TDU9 374 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 MRPL53Q96EL3 112 aaKnown RBP12.74□□□□□ -0.37
LINC00887-203ENST00000429578 C20orf173Q96LM9 149 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 AGRNO00468 2067 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 OXLD1Q5BKU9 147 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 ARL6IP6Q8N6S5 226 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 TCEAL7Q9BRU2 100 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 SMDT1Q9H4I9 107 aa12.74□□□□□ -0.37
LINC00887-203ENST00000429578 CSN1S1P47710 185 aa12.73□□□□□ -0.37
LINC00887-203ENST00000429578 SRSF3P84103 164 aaKnown RBP12.73□□□□□ -0.37
LINC00887-203ENST00000429578 PEA15Q15121 130 aa12.73□□□□□ -0.37
LINC00887-203ENST00000429578 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
LINC00887-203ENST00000429578 ZNF705FA8MVS1 300 aaPredicted RBP12.72□□□□□ -0.37
LINC00887-203ENST00000429578 PDE6DO43924 150 aa12.72□□□□□ -0.37
LINC00887-203ENST00000429578 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
LINC00887-203ENST00000429578 COMMD7Q86VX2 200 aa12.72□□□□□ -0.37
LINC00887-203ENST00000429578 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
LINC00887-203ENST00000429578 NDUFS6O75380 124 aaKnown RBP12.71□□□□□ -0.37
LINC00887-203ENST00000429578 GNG5P63218 68 aa12.71□□□□□ -0.37
LINC00887-203ENST00000429578 HIST1H2BAQ96A08 127 aa12.71□□□□□ -0.37
LINC00887-203ENST00000429578 RPUSD4Q96CM3 377 aaKnown RBP12.71□□□□□ -0.37
LINC00887-203ENST00000429578 MAP6D1Q9H9H5 199 aa12.71□□□□□ -0.37
LINC00887-203ENST00000429578 DIRC3C9JPN6 131 aa12.71□□□□□ -0.38
LINC00887-203ENST00000429578 F6UZH7 168 aa12.71□□□□□ -0.38
LINC00887-203ENST00000429578 TCRAP04437 139 aa12.71□□□□□ -0.38
LINC00887-203ENST00000429578 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.38
LINC00887-203ENST00000429578 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.38
LINC00887-203ENST00000429578 FAM110AQ9BQ89 295 aa12.71□□□□□ -0.38
LINC00887-203ENST00000429578 ATG101Q9BSB4 218 aa12.71□□□□□ -0.38
LINC00887-203ENST00000429578 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.38
LINC00887-203ENST00000429578 DEFB131AP59861 70 aa12.7□□□□□ -0.38
LINC00887-203ENST00000429578 ODF3L2Q3SX64 289 aa12.7□□□□□ -0.38
LINC00887-203ENST00000429578 UQCC3Q6UW78 93 aa12.7□□□□□ -0.38
LINC00887-203ENST00000429578 SCO2A0A1W2PP80 73 aa12.69□□□□□ -0.38
LINC00887-203ENST00000429578 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
LINC00887-203ENST00000429578 TMEM250H0YL14 139 aa12.69□□□□□ -0.38
LINC00887-203ENST00000429578 PEX7O00628 323 aa12.69□□□□□ -0.38
LINC00887-203ENST00000429578 SRP19P09132 144 aaKnown RBP12.69□□□□□ -0.38
LINC00887-203ENST00000429578 CD7P09564 240 aa12.69□□□□□ -0.38
LINC00887-203ENST00000429578 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
LINC00887-203ENST00000429578 C11orf52Q96A22 123 aa12.69□□□□□ -0.38
LINC00887-203ENST00000429578 SERTM2A0A1B0GWG4 89 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 OR11H12B2RN74 326 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 C9JQL5 133 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 PRB4P10163 310 aaPredicted RBP12.68□□□□□ -0.38
LINC00887-203ENST00000429578 NDUFA5Q16718 116 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 GTSCR1Q86UQ5 136 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 CYB561D1Q8N8Q1 229 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 TREM1Q9NP99 234 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 ZMAT5Q9UDW3 170 aaKnown RBP12.68□□□□□ -0.38
LINC00887-203ENST00000429578 RBAKDNA6NC62 111 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 G3V4G9 280 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 K7EQM0 130 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 DEFB1P60022 68 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 SAMD5Q5TGI4 173 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 C2CD4CQ8TF44 421 aa12.68□□□□□ -0.38
LINC00887-203ENST00000429578 IGKV2-40A0A087WW87 121 aaPredicted RBP12.67□□□□□ -0.38
LINC00887-203ENST00000429578 F6UB75 175 aa12.67□□□□□ -0.38
LINC00887-203ENST00000429578 IGKV2D-40P01614 121 aaPredicted RBP12.67□□□□□ -0.38
LINC00887-203ENST00000429578 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
LINC00887-203ENST00000429578 OR8A1Q8NGG7 326 aa12.67□□□□□ -0.38
LINC00887-203ENST00000429578 SLC35B3Q9H1N7 401 aa12.67□□□□□ -0.38
LINC00887-203ENST00000429578 SAV1Q9H4B6 383 aaPredicted RBP12.67□□□□□ -0.38
LINC00887-203ENST00000429578 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
LINC00887-203ENST00000429578 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
LINC00887-203ENST00000429578 EBLN2Q6P2I7 272 aa12.66□□□□□ -0.38
LINC00887-203ENST00000429578 APRG1Q8IVJ8 170 aa12.66□□□□□ -0.38
LINC00887-203ENST00000429578 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
LINC00887-203ENST00000429578 A0A0J9YX75 114 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 AKR1C3P42330 323 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 CNN1P51911 297 aaKnown RBP12.65□□□□□ -0.38
LINC00887-203ENST00000429578 ZNF124Q15973 351 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 TMEM75Q8N9X5 138 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 OR10J6PQ8NGY7 276 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 LINC00479Q96M42 142 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 ZNF705DP0CH99 300 aaPredicted RBP12.65□□□□□ -0.38
LINC00887-203ENST00000429578 ZNF705BP0CI00 300 aaPredicted RBP12.65□□□□□ -0.38
LINC00887-203ENST00000429578 KRTAP10-11P60412 298 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 SLC7A5P1Q8MH63 180 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 VGLL1Q99990 258 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 DERL1Q9BUN8 251 aa12.65□□□□□ -0.38
LINC00887-203ENST00000429578 TRAV8-1A0A0A6YYK1 113 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 FBLL1A6NHQ2 334 aaKnown RBP12.64□□□□□ -0.39
LINC00887-203ENST00000429578 NPIPB6E9PJ23 425 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 IGLV2-11P01706 119 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
LINC00887-203ENST00000429578 CEBPGP53567 150 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
LINC00887-203ENST00000429578 TMEM183BQ1AE95 376 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 ACTL10Q5JWF8 245 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms