RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 RNF182Q8N6D2 247 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 BTF3L4Q96K17 158 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 DERL1Q9BUN8 251 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 MRPL27Q9P0M9 148 aaKnown RBP7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 SMAD5-AS1Q9Y6J3 95 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 TRBV20OR9-2A0A075B6H5 130 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 TMEM213A2RRL7 107 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 CCL24O00175 119 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 NDUFA7O95182 113 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZNF705DP0CH99 300 aaPredicted RBP7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZNF705BP0CI00 300 aaPredicted RBP7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 ATP5IP56385 69 aaPredicted RBP7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 PKIAP61925 76 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZNF600Q6ZNG1 722 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 EXOC3-AS1Q8N2X6 119 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 RNF152Q8N8N0 203 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 FUT9Q9Y231 359 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZNF124Q15973 351 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 RPH3ALQ9UNE2 315 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 HIGD1AQ9Y241 93 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 YTHDF2Q9Y5A9 579 aaKnown RBP7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 MEGF8Q7Z7M0 2845 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 GZMBP10144 247 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 GCHFRP30047 84 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 YPEL3P61236 119 aaPredicted RBP7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 RANP62826 216 aaKnown RBP7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 DEFA6Q01524 100 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 KLK9Q2XQG4 91 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 C4orf3Q8WVX3 66 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 DPF1Q92782 380 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 C11orf52Q96A22 123 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 SFRP2Q96HF1 295 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 LINC00479Q96M42 142 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 TECRQ9NZ01 308 aaKnown RBP7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 KLK9Q9UKQ9 250 aa7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 TSSC4Q9Y5U2 329 aaPredicted RBP7.22□□□□□ -1.25
HMGCLL1-206ENST00000428842 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 H3BUA1 57 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 M0R3E3 92 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 GCGP01275 180 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 RHOBP62745 196 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 GNG5P63218 68 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 OR8I2Q8N0Y5 310 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 LINC00469Q8N7U9 141 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 C14orf144Q96I85 54 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 RHPN1-AS1Q9BWJ2 59 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 AURKAIP1Q9NWT8 199 aaPredicted RBP7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZNF586Q9NXT0 402 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZNF580Q9UK33 172 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 ARL2-SNX15V9GYD0 113 aa7.21□□□□□ -1.25
HMGCLL1-206ENST00000428842 PGPEP1LA6NFU8 196 aa7.21□□□□□ -1.26
HMGCLL1-206ENST00000428842 LINC01619G3V211 115 aa7.21□□□□□ -1.26
HMGCLL1-206ENST00000428842 BUB3O43684 328 aa7.21□□□□□ -1.26
HMGCLL1-206ENST00000428842 CNN1P51911 297 aaKnown RBP7.21□□□□□ -1.26
HMGCLL1-206ENST00000428842 RABAC1Q9UI14 185 aa7.21□□□□□ -1.26
HMGCLL1-206ENST00000428842 LY96Q9Y6Y9 160 aa7.21□□□□□ -1.26
HMGCLL1-206ENST00000428842 C9JCJ5 164 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 TSTD3H0UI37 97 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 GP9P14770 177 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 DDTP30046 118 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 SELENOTP62341 195 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 KLF5Q13887 457 aaPredicted RBP7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 REC114Q7Z4M0 266 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 OCC1Q8TAD7 63 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 TMEM190Q8WZ59 177 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 TRAV9-1A0A075B6T8 112 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 H3BRN7 92 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 CBLN1P23435 193 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 GPHB5Q86YW7 130 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 TMEM18Q96B42 140 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 TXN2Q99757 166 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 CITED1Q99966 193 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 SHANK2-AS3Q9BTD1 123 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 TRAPPC1Q9Y5R8 145 aa7.2□□□□□ -1.26
HMGCLL1-206ENST00000428842 TRAV30A0A087WSZ9 112 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 TMEM89A2RUT3 159 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 C2orf70A6NJV1 201 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 GGTLC3B5MD39 225 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 F6UB75 175 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 C8orf88P0DMB2 117 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 RELQ04864 619 aaPredicted RBP7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 C3orf56Q8N813 242 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 OR10G8Q8NGN5 311 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 WFDC10AQ9H1F0 79 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 PRO1933Q9H354 126 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 DAZ1Q9NQZ3 744 aaKnown RBP7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 TGP01266 2768 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 TRAV8-1A0A0A6YYK1 113 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 K7EN84 100 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 NDUFA4O00483 81 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 CHEK1O14757 476 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 STXBP6Q8NFX7 210 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 METTL26Q96S19 204 aa7.19□□□□□ -1.26
HMGCLL1-206ENST00000428842 TRAV34A0A0B4J273 112 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms