RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 RPH3ALQ9UNE2 315 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 TRAV8-2A0A0B4J237 113 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 DIRC3C9JPN6 131 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 ISLRO14498 428 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 SOCS3O14543 225 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 UBE2G1P62253 170 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 LCN12Q6JVE5 192 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 PRIMA1Q86XR5 153 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 CLRN3Q8NCR9 226 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 LY96Q9Y6Y9 160 aa9.6□□□□□ -0.87
HMGB3P4-201ENST00000428776 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 FBLL1A6NHQ2 334 aaKnown RBP9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 B4DEV8 164 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 M0R036 132 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 M0R3E3 92 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 ID1P41134 155 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 GNG4P50150 75 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 PSG3Q16557 428 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 IGFL4Q6B9Z1 124 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 GOLT1AQ6ZVE7 132 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 RNF182Q8N6D2 247 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 DCANP1Q8TF63 244 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 MS4A6AQ9H2W1 248 aa9.59□□□□□ -0.87
HMGB3P4-201ENST00000428776 IGKV3-7A0A075B6H7 116 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 TRBV6-1A0A0K0K1D8 114 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 DNASE2O00115 360 aaPredicted RBP9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 PF4P02776 101 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 HLA-DMBP28068 263 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 DEFB114Q30KQ6 69 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 TMEM75Q8N9X5 138 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 DYNLRB2Q8TF09 96 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 IGF2BP2-AS1Q96M15 143 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 SELENOKQ9Y6D0 94 aa9.58□□□□□ -0.88
HMGB3P4-201ENST00000428776 TRAV2A0A0B4J234 112 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 TRAV34A0A0B4J273 112 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 RBAKDNA6NC62 111 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 ZNF705FA8MVS1 300 aaPredicted RBP9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 K7EQG2 157 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 IGLV2-11P01706 119 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 RHEBQ15382 184 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 ADIRFQ15847 76 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 RBPMS2Q6ZRY4 209 aaKnown RBP9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 LINC01551Q86U37 167 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 GBGT1Q8N5D6 347 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 OCC1Q8TAD7 63 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 SMIM12Q96EX1 92 aa9.57□□□□□ -0.88
HMGB3P4-201ENST00000428776 C7orf77A4D0Y5 90 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 PGPEP1LA6NFU8 196 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 TSPAN4O14817 238 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 LTAP01374 205 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 FLI1Q01543 452 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 ATRAIDQ6UW56 229 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 BAGE2Q86Y30 109 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 LINC00482Q8N8I6 264 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 ZNF738Q8NE65 137 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 C20orf173Q96LM9 149 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 PSG8Q9UQ74 426 aa9.56□□□□□ -0.88
HMGB3P4-201ENST00000428776 FBN1P35555 2871 aaKnown RBP9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 IGLV2-8P01709 118 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 SNRPD3P62318 126 aaKnown RBP9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 Q86TA4 180 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 WFDC3Q8IUB2 231 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 TMEM61Q8N0U2 210 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 TMEM158Q8WZ71 300 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 SGK494Q96LW2 274 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 RPS10P5Q9NQ39 176 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 ZFP30Q9Y2G7 519 aa9.55□□□□□ -0.88
HMGB3P4-201ENST00000428776 A0A087WWC5 75 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 PRAC2D3DTV9 90 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 SAP30O75446 220 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 MT-ND4LP03901 98 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 TFPI2P48307 235 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 SAPCD1Q5SSQ6 148 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 TMEM183AQ8IXX5 376 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 OR2K2Q8NGT1 345 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 SPAG8Q99932 426 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 VGLL1Q99990 258 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 MLST8Q9BVC4 326 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 BIN3Q9NQY0 253 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 AURKAIP1Q9NWT8 199 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 VWFP04275 2813 aa9.54□□□□□ -0.88
HMGB3P4-201ENST00000428776 K7EN84 100 aa9.53□□□□□ -0.88
HMGB3P4-201ENST00000428776 GCGP01275 180 aa9.53□□□□□ -0.88
HMGB3P4-201ENST00000428776 C9orf47Q6ZRZ4 202 aa9.53□□□□□ -0.88
HMGB3P4-201ENST00000428776 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
HMGB3P4-201ENST00000428776 OR10J6PQ8NGY7 276 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms