RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 GNB1LQ9BYB4 327 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 SPCS1Q9Y6A9 102 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 A0A087X0K7 114 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.04
TCOF1-204ENST00000427724 PAX1P15863 534 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 LRRC75A-AS1Q8N1F1 130 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 Q8NFD4 153 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 TRAV9-1A0A075B6T8 112 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 H0YJW9 148 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 OVOL1O14753 267 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 NBEAP1P0C6P0 100 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 TMEM97Q5BJF2 176 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 ARHGAP32A7KAX9 2087 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 ANKRD17O75179 2603 aaKnown RBP8.54□□□□□ -1.04
TCOF1-204ENST00000427724 OR11H12B2RN74 326 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 IGKV1-16P04430 117 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 TEX36Q5VZQ5 186 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 BCL6BQ8N143 479 aaPredicted RBP8.54□□□□□ -1.04
TCOF1-204ENST00000427724 TYMSP04818 313 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 PYYP10082 97 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 MLANAQ16655 118 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 TEX43Q6ZNM6 134 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 ZNF257Q9Y2Q1 563 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 NACAE9PAV3 2078 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 IGKV3OR2-268A0A0C4DH90 116 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 CENPVL3A0A0U1RRI6 287 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 BLCAPP62952 87 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 TMEM116Q8NCL8 245 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 UBE2E2Q96LR5 201 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 SCRT1Q9BWW7 348 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 NUP210LQ5VU65 1888 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 TRAV5A0A0B4J249 113 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 HIGD1CA8MV81 97 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 OR10J3Q5JRS4 329 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 USMG5Q96IX5 58 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 RNF5Q99942 180 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 KAAG1Q9UBP8 84 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
TCOF1-204ENST00000427724 TEP1Q99973 2627 aaKnown RBP8.53□□□□□ -1.04
TCOF1-204ENST00000427724 CNTFRP26992 372 aa8.52□□□□□ -1.04
TCOF1-204ENST00000427724 LMO1P25800 156 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 RIGQ13278 110 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 TMEM262E9PQX1 116 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 DEFB136Q30KP8 78 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 OR10AG1Q8NH19 301 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 RNF125Q96EQ8 232 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 FOXC2Q99958 501 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 GTSF1LQ9H1H1 148 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 AP5S1Q9NUS5 200 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 PHLDA3Q9Y5J5 127 aa8.52□□□□□ -1.05
TCOF1-204ENST00000427724 ATP5IP56385 69 aaPredicted RBP8.51□□□□□ -1.05
TCOF1-204ENST00000427724 GNG5P63218 68 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 ZNF562Q6V9R5 426 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 OR2K2Q8NGT1 345 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 C19orf24Q9BVV8 132 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 IZUMO1RA6ND01 250 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 C10orf142B7Z368 130 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 SCGB1C2P0DMR2 95 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 CDKN1BP46527 198 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 HBBP68871 147 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 PRCDQ00LT1 54 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 MRPL32Q9BYC8 188 aaKnown RBP8.51□□□□□ -1.05
TCOF1-204ENST00000427724 LINC01619G3V211 115 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 MSMPQ1L6U9 139 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 PRSS57Q6UWY2 283 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 PYGO2Q9BRQ0 406 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 ZMAT4Q9H898 229 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 PEX7O00628 323 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 AREGP15514 252 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 C8orf86Q6ZUL3 223 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 OR52E5Q8NH55 327 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 CACNG8Q8WXS5 425 aa8.51□□□□□ -1.05
TCOF1-204ENST00000427724 PSG9Q00887 426 aa8.5□□□□□ -1.05
TCOF1-204ENST00000427724 DIAPH2-AS1Q14236 149 aa8.5□□□□□ -1.05
TCOF1-204ENST00000427724 KRTAP27-1Q3LI81 207 aa8.5□□□□□ -1.05
TCOF1-204ENST00000427724 JKAMPQ9P055 326 aa8.5□□□□□ -1.05
TCOF1-204ENST00000427724 MRPS16Q9Y3D3 137 aaKnown RBP8.5□□□□□ -1.05
TCOF1-204ENST00000427724 TSSC4Q9Y5U2 329 aaPredicted RBP8.5□□□□□ -1.05
TCOF1-204ENST00000427724 RPL15P61313 204 aaKnown RBP8.5□□□□□ -1.05
TCOF1-204ENST00000427724 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
TCOF1-204ENST00000427724 OSTCQ9NRP0 149 aa8.5□□□□□ -1.05
TCOF1-204ENST00000427724 IGHV4-31P0DP07 118 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 IGLL1P15814 213 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 YPEL4Q96NS1 127 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 RCHY1Q96PM5 261 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 CLPSL1A2RUU4 121 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 CD5LO43866 347 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
TCOF1-204ENST00000427724 SYT8Q8NBV8 401 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 ST20Q9HBF5 79 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 APOHP02749 345 aaPredicted RBP8.49□□□□□ -1.05
TCOF1-204ENST00000427724 FXYD7P58549 80 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 Q0VG73 95 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 TMEM189A5PLL7 270 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 H3BVH4 76 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 CMC4P56277 68 aaPredicted RBP8.49□□□□□ -1.05
TCOF1-204ENST00000427724 DEFB131AP59861 70 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 YPEL3P61236 119 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms