RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 HRH4Q9H3N8 390 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF331Q9NQX6 463 aaPredicted RBP5.45□□□□□ -1.54
LINC01049-201ENST00000426840 RPRMQ9NS64 109 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 HUWE1Q7Z6Z7 4374 aaKnown RBP5.44□□□□□ -1.54
LINC01049-201ENST00000426840 TRBV19A0A075B6N1 114 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 KIR2DL5BA0A0G2JN68 375 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 KIR2DL5BA0A0G2JPC4 375 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 A0A1W2PPV4 95 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 KANTRA0A1W2PQU2 76 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 H3BMM0 161 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 SLC17A3O00476 420 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 BCL2L11O43521 198 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 MBP02144 154 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 NBEAP1P0C6P0 100 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 NHLRC4P0CG21 123 aaPredicted RBP5.44□□□□□ -1.54
LINC01049-201ENST00000426840 RPL35AP18077 110 aaKnown RBP5.44□□□□□ -1.54
LINC01049-201ENST00000426840 PSG3Q16557 428 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 GUK1Q16774 197 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 ACTL10Q5JWF8 245 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 GDF5OSQ5U4N7 250 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 FAM122CQ6P4D5 195 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 TRPT1Q86TN4 253 aaKnown RBP5.44□□□□□ -1.54
LINC01049-201ENST00000426840 KIR2DL5AQ8N109 375 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 RNF182Q8N6D2 247 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 KIR2DL5BQ8NHK3 375 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 LRRC20Q8TCA0 184 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 FXYD5Q96DB9 178 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 TM2D3Q9BRN9 247 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 PAXXQ9BUH6 204 aa5.44□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF471Q9BX82 626 aaPredicted RBP5.44□□□□□ -1.54
LINC01049-201ENST00000426840 SAV1Q9H4B6 383 aaPredicted RBP5.44□□□□□ -1.54
LINC01049-201ENST00000426840 A0A0J9YX75 114 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 A8MTW9 85 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 F6UB75 175 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF253O75346 499 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 GIG44P09565 113 aaPredicted RBP5.43□□□□□ -1.54
LINC01049-201ENST00000426840 SEC11BP0C7V7 166 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 STAG3L2P0CL84 134 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 STAG3L3P0CL85 134 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 TAS2R45P59539 299 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF726P1Q15940 193 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 ZFP69Q49AA0 526 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 TMEM41BQ5BJD5 291 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 LCN15Q6UWW0 184 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 FOXI2Q6ZQN5 318 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 BAP18Q8IXM2 172 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 C9orf62Q8N4C0 152 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 RAB24Q969Q5 203 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 WWC2-AS2Q96NR7 200 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 SLC50A1Q9BRV3 221 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 ACTR3CQ9C0K3 210 aaPredicted RBP5.43□□□□□ -1.54
LINC01049-201ENST00000426840 CSTL1Q9H114 145 aa5.43□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF705FA8MVS1 300 aaPredicted RBP5.42□□□□□ -1.54
LINC01049-201ENST00000426840 PRAC2D3DTV9 90 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 UBE2CO00762 179 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 HMGB3O15347 200 aaKnown RBP5.42□□□□□ -1.54
LINC01049-201ENST00000426840 OR7C2O60412 319 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 PFDN1O60925 122 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 OR10J4P0C629 311 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF705DP0CH99 300 aaPredicted RBP5.42□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF705BP0CI00 300 aaPredicted RBP5.42□□□□□ -1.54
LINC01049-201ENST00000426840 PRB4P10163 310 aaPredicted RBP5.42□□□□□ -1.54
LINC01049-201ENST00000426840 HLA-DRB4P13762 266 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 CDC34P49427 236 aaPredicted RBP5.42□□□□□ -1.54
LINC01049-201ENST00000426840 EIF5AP63241 154 aaKnown RBP5.42□□□□□ -1.54
LINC01049-201ENST00000426840 PDE6HQ13956 83 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 KHDC3LQ587J8 217 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 AKR1C8PQ5T2L2 129 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 PQLC2Q6ZP29 291 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 SSX7Q7RTT5 188 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 STHQ8IWL8 128 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 STOML3Q8TAV4 291 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 SUN5Q8TC36 379 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 BLNKQ8WV28 456 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 CLEC5AQ9NY25 188 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 HLA-DRB4X5D2U9 266 aa5.42□□□□□ -1.54
LINC01049-201ENST00000426840 M0R3E3 92 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 IGKV3-20P01619 116 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 ARL14EPLP0DKL9 152 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 TPT1P13693 172 aaKnown RBP5.41□□□□□ -1.54
LINC01049-201ENST00000426840 NKX2-5P52952 324 aaPredicted RBP5.41□□□□□ -1.54
LINC01049-201ENST00000426840 APOC4P55056 127 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 PSG9Q00887 426 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 EBLN2Q6P2I7 272 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 MORN3Q6PF18 240 aaPredicted RBP5.41□□□□□ -1.54
LINC01049-201ENST00000426840 AMTNQ6UX39 209 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 Q6ZWC4 215 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 SLC51BQ86UW2 128 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 LYPD1Q8N2G4 141 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 EXOC3-AS1Q8N2X6 119 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF738Q8NE65 137 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 OR8A1Q8NGG7 326 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 MBD3L1Q8WWY6 194 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 RPUSD4Q96CM3 377 aaKnown RBP5.41□□□□□ -1.54
LINC01049-201ENST00000426840 MRPL53Q96EL3 112 aaKnown RBP5.41□□□□□ -1.54
LINC01049-201ENST00000426840 PHYHIPLQ96FC7 376 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 OVOL2Q9BRP0 275 aa5.41□□□□□ -1.54
LINC01049-201ENST00000426840 RETNQ9HD89 108 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms