RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 DAZAP2Q15038 168 aaPredicted RBP12.8□□□□□ -0.36
PKP4-205ENST00000426248 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
PKP4-205ENST00000426248 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
PKP4-205ENST00000426248 RNF183Q96D59 192 aa12.8□□□□□ -0.36
PKP4-205ENST00000426248 CFHR2P36980 270 aa12.8□□□□□ -0.36
PKP4-205ENST00000426248 FBXL19-AS1Q494R0 122 aa12.8□□□□□ -0.36
PKP4-205ENST00000426248 C20orf78Q9BR46 151 aa12.79□□□□□ -0.36
PKP4-205ENST00000426248 DSCAMO60469 2012 aa12.79□□□□□ -0.36
PKP4-205ENST00000426248 IGHV3OR16-10A0A075B7F0 116 aa12.79□□□□□ -0.36
PKP4-205ENST00000426248 C10orf113Q5VZT2 155 aa12.79□□□□□ -0.36
PKP4-205ENST00000426248 PRNTQ86SH4 94 aa12.79□□□□□ -0.36
PKP4-205ENST00000426248 HIST1H4GQ99525 98 aa12.79□□□□□ -0.36
PKP4-205ENST00000426248 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
PKP4-205ENST00000426248 UFC1Q9Y3C8 167 aa12.79□□□□□ -0.36
PKP4-205ENST00000426248 TRBV6-6A0A0A6YYG2 114 aa12.78□□□□□ -0.36
PKP4-205ENST00000426248 FXYD2P54710 66 aa12.78□□□□□ -0.36
PKP4-205ENST00000426248 TMEM249Q2WGJ8 235 aa12.78□□□□□ -0.36
PKP4-205ENST00000426248 HTN1P15515 57 aa12.78□□□□□ -0.36
PKP4-205ENST00000426248 INSL3P51460 131 aa12.78□□□□□ -0.36
PKP4-205ENST00000426248 ERHP84090 104 aaKnown RBP12.78□□□□□ -0.36
PKP4-205ENST00000426248 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
PKP4-205ENST00000426248 SAA2P0DJI9 122 aaPredicted RBP12.77□□□□□ -0.36
PKP4-205ENST00000426248 ASCL2Q99929 193 aa12.77□□□□□ -0.36
PKP4-205ENST00000426248 ARHGAP32A7KAX9 2087 aa12.77□□□□□ -0.36
PKP4-205ENST00000426248 CGB1A6NKQ9 187 aa12.77□□□□□ -0.36
PKP4-205ENST00000426248 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.36
PKP4-205ENST00000426248 USP24Q9UPU5 2620 aa12.77□□□□□ -0.36
PKP4-205ENST00000426248 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.37
PKP4-205ENST00000426248 LYZP61626 148 aa12.77□□□□□ -0.37
PKP4-205ENST00000426248 ATP5L2Q7Z4Y8 100 aa12.77□□□□□ -0.37
PKP4-205ENST00000426248 Q8TCH9 128 aa12.77□□□□□ -0.37
PKP4-205ENST00000426248 SMPXQ9UHP9 88 aa12.77□□□□□ -0.37
PKP4-205ENST00000426248 Q8N7P7 452 aa12.77□□□□□ -0.37
PKP4-205ENST00000426248 IFI27P40305 119 aaPredicted RBP12.76□□□□□ -0.37
PKP4-205ENST00000426248 SHISA2Q6UWI4 295 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 LHBP01229 141 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 IGLV2-8P01709 118 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 BPESC1Q9GZL8 116 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 RPUSD1Q9UJJ7 312 aaKnown RBP12.76□□□□□ -0.37
PKP4-205ENST00000426248 GATA3P23771 443 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 VDAC2P45880 294 aaPredicted RBP12.76□□□□□ -0.37
PKP4-205ENST00000426248 EFNA4P52798 201 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 ZNF747Q9BV97 191 aa12.76□□□□□ -0.37
PKP4-205ENST00000426248 RIGQ13278 110 aa12.75□□□□□ -0.37
PKP4-205ENST00000426248 VMA21Q3ZAQ7 101 aa12.75□□□□□ -0.37
PKP4-205ENST00000426248 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
PKP4-205ENST00000426248 NRGNQ92686 78 aa12.75□□□□□ -0.37
PKP4-205ENST00000426248 F8W1H4 67 aa12.75□□□□□ -0.37
PKP4-205ENST00000426248 HSPE1P61604 102 aaKnown RBP12.75□□□□□ -0.37
PKP4-205ENST00000426248 BOD1L2Q8IYS8 172 aa12.75□□□□□ -0.37
PKP4-205ENST00000426248 TEX29Q8N6K0 151 aa12.75□□□□□ -0.37
PKP4-205ENST00000426248 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
PKP4-205ENST00000426248 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
PKP4-205ENST00000426248 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
PKP4-205ENST00000426248 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
PKP4-205ENST00000426248 GTSCR1Q86UQ5 136 aa12.74□□□□□ -0.37
PKP4-205ENST00000426248 CTSZQ9UBR2 303 aa12.74□□□□□ -0.37
PKP4-205ENST00000426248 GPR82Q96P67 336 aa12.74□□□□□ -0.37
PKP4-205ENST00000426248 TRAV8-1A0A0A6YYK1 113 aa12.74□□□□□ -0.37
PKP4-205ENST00000426248 PIMREGQ9BSJ6 248 aa12.74□□□□□ -0.37
PKP4-205ENST00000426248 CRXO43186 299 aaPredicted RBP12.73□□□□□ -0.37
PKP4-205ENST00000426248 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
PKP4-205ENST00000426248 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 SLC25A33Q9BSK2 321 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 SPANXB1Q9NS25 103 aaPredicted RBP12.73□□□□□ -0.37
PKP4-205ENST00000426248 TMEM160Q9NX00 188 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 MOSP00540 346 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 PSMB2P49721 201 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 TCTEX1D4Q5JR98 221 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 MT-ATP8P03928 68 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 IGF2BP2-AS1Q96M15 143 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
PKP4-205ENST00000426248 A0A1B0GUT8 65 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 SCGB1C2P0DMR2 95 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 ZNF134P52741 427 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 MORN5Q5VZ52 161 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 TEX36Q5VZQ5 186 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 IFI27L1Q96BM0 104 aa12.73□□□□□ -0.37
PKP4-205ENST00000426248 NPIPB11E5RHQ5 1161 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 TTC32Q5I0X7 151 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 GLMPQ8WWB7 406 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 KALRNO60229 2985 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 CIARTQ8N365 385 aaPredicted RBP12.72□□□□□ -0.37
PKP4-205ENST00000426248 CITED1Q99966 193 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 TMEM133Q9H2Q1 129 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 TRBV20-1A0A075B6N2 111 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 C15orf65H3BRN8 121 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 C17orf58Q2M2W7 97 aa12.72□□□□□ -0.37
PKP4-205ENST00000426248 IGSF10Q6WRI0 2623 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.37
PKP4-205ENST00000426248 KLRD1Q13241 179 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 GAGE5Q13069 117 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 GAGE6Q13070 117 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 LINC00305Q7Z4B0 112 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 PRELID3AQ96N28 172 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 DKK2Q9UBU2 259 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms