RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 C1QTNF4Q9BXJ3 329 aa9.84□□□□□ -0.83
SNX3-204ENST00000426155 SMIM3Q9BZL3 60 aa9.84□□□□□ -0.83
SNX3-204ENST00000426155 MFFQ9GZY8 342 aa9.84□□□□□ -0.83
SNX3-204ENST00000426155 DNAJC4Q9NNZ3 241 aa9.84□□□□□ -0.83
SNX3-204ENST00000426155 G3V3Q6 166 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 M0R2Z0 102 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 IGLC2P0DOY2 106 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 PSG9Q00887 426 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 PSG3Q16557 428 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 SPATA31B1PQ5VZV4 182 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 CEMP1Q6PRD7 247 aaPredicted RBP9.83□□□□□ -0.84
SNX3-204ENST00000426155 ZNF705AQ6ZN79 300 aaPredicted RBP9.83□□□□□ -0.84
SNX3-204ENST00000426155 OR1L4Q8NGR5 311 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 PHLDA1Q8WV24 401 aaPredicted RBP9.83□□□□□ -0.84
SNX3-204ENST00000426155 PHYHIPLQ96FC7 376 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 PFDN5Q99471 154 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 WDR61Q9GZS3 305 aaKnown RBP9.83□□□□□ -0.84
SNX3-204ENST00000426155 CELA1Q9UNI1 258 aa9.83□□□□□ -0.84
SNX3-204ENST00000426155 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 NUPR2A6NF83 97 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 A8MTW9 85 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 ZNF705FA8MVS1 300 aaPredicted RBP9.82□□□□□ -0.84
SNX3-204ENST00000426155 TEX46H3BTG2 121 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 ARPC5O15511 151 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 SCO1O75880 301 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 NMBP08949 121 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 HIST1H1AQ02539 215 aaPredicted RBP9.82□□□□□ -0.84
SNX3-204ENST00000426155 BTN1A1Q13410 526 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 SPINK13Q1W4C9 94 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 UQCC3Q6UW78 93 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 LCN15Q6UWW0 184 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 C1orf158Q8N1D5 194 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 CLUHP3Q96NS8 147 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 ATP5SQ99766 215 aa9.82□□□□□ -0.84
SNX3-204ENST00000426155 ZNF331Q9NQX6 463 aaPredicted RBP9.82□□□□□ -0.84
SNX3-204ENST00000426155 KANTRA0A1W2PQU2 76 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 MPDU1O75352 247 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 PET100P0DJ07 73 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 PYYP10082 97 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 RPL12P30050 165 aaKnown RBP9.81□□□□□ -0.84
SNX3-204ENST00000426155 BAP18Q8IXM2 172 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 OR8A1Q8NGG7 326 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 RPUSD4Q96CM3 377 aaKnown RBP9.81□□□□□ -0.84
SNX3-204ENST00000426155 ZNF586Q9NXT0 402 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 RFNGQ9Y644 331 aa9.81□□□□□ -0.84
SNX3-204ENST00000426155 TRAV12-2A0A075B6T6 113 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
SNX3-204ENST00000426155 ZNF345Q14585 488 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 ALKAL2Q6UX46 152 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 MIR17HGQ75NE6 70 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 SAT2Q96F10 170 aaPredicted RBP9.8□□□□□ -0.84
SNX3-204ENST00000426155 SLC50A1Q9BRV3 221 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 PARD6GQ9BYG4 376 aaPredicted RBP9.8□□□□□ -0.84
SNX3-204ENST00000426155 HRH4Q9H3N8 390 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 WFDC1Q9HC57 220 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 RNF24Q9Y225 148 aa9.8□□□□□ -0.84
SNX3-204ENST00000426155 JTBO76095 146 aa9.79□□□□□ -0.84
SNX3-204ENST00000426155 DUSP14O95147 198 aaKnown RBP9.79□□□□□ -0.84
SNX3-204ENST00000426155 PRM2P04554 102 aa9.79□□□□□ -0.84
SNX3-204ENST00000426155 EMP1P54849 157 aa9.79□□□□□ -0.84
SNX3-204ENST00000426155 RHOBP62745 196 aa9.79□□□□□ -0.84
SNX3-204ENST00000426155 FLI1Q01543 452 aaPredicted RBP9.79□□□□□ -0.84
SNX3-204ENST00000426155 Q6ZTC4 211 aa9.79□□□□□ -0.84
SNX3-204ENST00000426155 VPS13DQ5THJ4 4388 aa9.79□□□□□ -0.84
SNX3-204ENST00000426155 EIF3GO75821 320 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNX3-204ENST00000426155 KCNRGQ8N5I3 272 aa9.78□□□□□ -0.84
SNX3-204ENST00000426155 PCNPQ8WW12 178 aaKnown RBP9.78□□□□□ -0.84
SNX3-204ENST00000426155 FAM167A-AS1Q96KT0 104 aa9.78□□□□□ -0.84
SNX3-204ENST00000426155 IGF2BP2-AS1Q96M15 143 aa9.78□□□□□ -0.84
SNX3-204ENST00000426155 NEU1Q99519 415 aa9.78□□□□□ -0.84
SNX3-204ENST00000426155 GOLT1BQ9Y3E0 138 aa9.78□□□□□ -0.84
SNX3-204ENST00000426155 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 M0R3E3 92 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 NDUFB4O95168 129 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 INSP01308 110 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 KIR3DS1Q14943 382 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 C12orf74Q32Q52 190 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 CLRN3Q8NCR9 226 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 BLNKQ8WV28 456 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 LINC00476Q8WZB0 136 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 TMEM14CQ9P0S9 112 aa9.77□□□□□ -0.85
SNX3-204ENST00000426155 KLK5Q9Y337 293 aaPredicted RBP9.77□□□□□ -0.85
SNX3-204ENST00000426155 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
SNX3-204ENST00000426155 LOC102723971A0A1B0GUV8 181 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 C17orf112F2Z3M2 114 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 BCL2L11O43521 198 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 OR10J4P0C629 311 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 GUK1Q16774 197 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 FFAR4Q5NUL3 377 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 EXOC3-AS1Q8N2X6 119 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 INO80EQ8NBZ0 244 aaPredicted RBP9.76□□□□□ -0.85
SNX3-204ENST00000426155 TMEM208Q9BTX3 173 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 KCNIP2Q9NS61 270 aa9.76□□□□□ -0.85
SNX3-204ENST00000426155 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
SNX3-204ENST00000426155 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
SNX3-204ENST00000426155 ZNF705GA8MUZ8 300 aaPredicted RBP9.75□□□□□ -0.85
SNX3-204ENST00000426155 LY6G6CO95867 125 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms