RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 RLN2P04090 185 aa12.88□□□□□ -0.35
AC004540.1-203ENST00000421862 OR5I1Q13606 314 aa12.88□□□□□ -0.35
AC004540.1-203ENST00000421862 BAK1Q16611 211 aa12.88□□□□□ -0.35
AC004540.1-203ENST00000421862 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
AC004540.1-203ENST00000421862 RBM38Q9H0Z9 239 aaKnown RBP12.88□□□□□ -0.35
AC004540.1-203ENST00000421862 LINC00854A0A1B0GVQ3 168 aa12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 C7orf66A4D0T2 115 aa12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 NPIPB6E9PJ23 425 aa12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 COX7A2P2O60397 106 aa12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 SNRPCP09234 159 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 ESRGQ1W209 222 aa12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 MITD1Q8WV92 249 aa12.87□□□□□ -0.35
AC004540.1-203ENST00000421862 A0A0J9YY99 117 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 H3BQ15 152 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 H3BTX0 84 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 GAGE7O76087 117 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 MBPP02686 304 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 C10orf113Q5VZT2 155 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 C18orf15Q96N68 181 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 SDHCQ99643 169 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
AC004540.1-203ENST00000421862 ZNF253O75346 499 aa12.85□□□□□ -0.35
AC004540.1-203ENST00000421862 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
AC004540.1-203ENST00000421862 LEPP41159 167 aa12.85□□□□□ -0.35
AC004540.1-203ENST00000421862 KRTAP10-2P60368 255 aa12.85□□□□□ -0.35
AC004540.1-203ENST00000421862 GUK1Q16774 197 aa12.85□□□□□ -0.35
AC004540.1-203ENST00000421862 TRIQKQ629K1 86 aa12.85□□□□□ -0.35
AC004540.1-203ENST00000421862 Q6ZTI0 123 aa12.84□□□□□ -0.35
AC004540.1-203ENST00000421862 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
AC004540.1-203ENST00000421862 ZNF431Q8TF32 576 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-203ENST00000421862 TRAV12-3A0A0B4J271 114 aa12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 CAMLGP49069 296 aa12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 INPP1P49441 399 aa12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 Q6ZRN7 208 aaPredicted RBP12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 VSIG2Q96IQ7 327 aa12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 GSKIPQ9P0R6 139 aa12.83□□□□□ -0.36
AC004540.1-203ENST00000421862 A0A096LPF7 62 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 VWC2Q2TAL6 325 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 NRARPQ7Z6K4 114 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 ZNF680Q8NEM1 530 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 WDR83OSQ9Y284 106 aa12.82□□□□□ -0.36
AC004540.1-203ENST00000421862 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 KLLNB2CW77 178 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 J3KRW8 73 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 CNPY1Q3B7I2 92 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 OR1L4Q8NGR5 311 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 PFDN5Q99471 154 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 SCRT2Q9NQ03 307 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 ZNF586Q9NXT0 402 aa12.81□□□□□ -0.36
AC004540.1-203ENST00000421862 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 C7orf71A4D174 169 aa12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 CENPXA8MT69 81 aa12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 CCSO14618 274 aa12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 LINC00315P59091 139 aa12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 Q6ZRG5 221 aa12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 C20orf85Q9H1P6 137 aa12.8□□□□□ -0.36
AC004540.1-203ENST00000421862 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
AC004540.1-203ENST00000421862 IL7P13232 177 aa12.79□□□□□ -0.36
AC004540.1-203ENST00000421862 RAB31Q13636 194 aa12.79□□□□□ -0.36
AC004540.1-203ENST00000421862 ANXA2RQ3ZCQ2 193 aa12.79□□□□□ -0.36
AC004540.1-203ENST00000421862 CHAC2Q8WUX2 184 aa12.79□□□□□ -0.36
AC004540.1-203ENST00000421862 UQCC1Q9NVA1 299 aa12.79□□□□□ -0.36
AC004540.1-203ENST00000421862 L7N2F9 121 aa12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 M0R3E3 92 aa12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 ZNF324O75467 553 aaPredicted RBP12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 RPL29P47914 159 aaKnown RBP12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 VAMP2P63027 116 aa12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 PDE6HQ13956 83 aa12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 SLC39A9Q9NUM3 307 aa12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 TMEM14CQ9P0S9 112 aa12.78□□□□□ -0.36
AC004540.1-203ENST00000421862 SPINK4O60575 86 aa12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 CST7O76096 145 aa12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 NDUFB4O95168 129 aa12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 CRISP2P16562 243 aa12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 CAV2P51636 162 aa12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 TCL1AP56279 114 aa12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 EIF4E3Q8N5X7 224 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-203ENST00000421862 HERC1Q15751 4861 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 TRGV2A0A075B6R0 118 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 CD300CQ08708 224 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 ERCC8Q13216 396 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms