RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 CYTL1Q9NRR1 136 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
LINC01238-201ENST00000416204 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 DNAH8Q96JB1 4490 aa6.46□□□□□ -1.37
LINC01238-201ENST00000416204 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 KRBOX1C9JBD0 128 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 CRXO43186 299 aaPredicted RBP6.46□□□□□ -1.38
LINC01238-201ENST00000416204 INSP01308 110 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 MBPP02686 304 aaPredicted RBP6.46□□□□□ -1.38
LINC01238-201ENST00000416204 RPL12P30050 165 aaKnown RBP6.46□□□□□ -1.38
LINC01238-201ENST00000416204 PAX9P55771 341 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 LYZP61626 148 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 ZNF90Q03938 601 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 TOR2AQ5JU69 321 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 TMEM268Q5VZI3 342 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 CCDC28AQ8IWP9 274 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 OR4D5Q8NGN0 318 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 SAT2Q96F10 170 aaPredicted RBP6.46□□□□□ -1.38
LINC01238-201ENST00000416204 C16orf92Q96LL3 132 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 SLC25A39Q9BZJ4 359 aaPredicted RBP6.46□□□□□ -1.38
LINC01238-201ENST00000416204 DOK5Q9P104 306 aa6.46□□□□□ -1.38
LINC01238-201ENST00000416204 BORCS7-ASMTA0A0B4J1R7 106 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 RAB19A4D1S5 217 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 CBY3A6NI87 242 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 TEX46H3BTG2 121 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 CNN1P51911 297 aaKnown RBP6.45□□□□□ -1.38
LINC01238-201ENST00000416204 UQCC3Q6UW78 93 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 RNF182Q8N6D2 247 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 SLC24A4Q8NFF2 622 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 LHFPL5Q8TAF8 219 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 GNPNAT1Q96EK6 184 aaPredicted RBP6.45□□□□□ -1.38
LINC01238-201ENST00000416204 C17orf77Q96MU5 243 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 CLUHP3Q96NS8 147 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 LINC01587Q99440 93 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 SLC25A31Q9H0C2 315 aa6.45□□□□□ -1.38
LINC01238-201ENST00000416204 NOP10Q9NPE3 64 aaKnown RBP6.45□□□□□ -1.38
LINC01238-201ENST00000416204 LSM5Q9Y4Y9 91 aaKnown RBP6.45□□□□□ -1.38
LINC01238-201ENST00000416204 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
LINC01238-201ENST00000416204 ISLRO14498 428 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 ATG12O94817 140 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 SCGB1D2O95969 90 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 HOXA5P20719 270 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 SPCS3P61009 180 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 BLOC1S1P78537 153 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 ID3Q02535 119 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 BAXQ07812 192 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 C2orf83Q53S99 150 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 NMSQ5H8A3 153 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
LINC01238-201ENST00000416204 OR8I2Q8N0Y5 310 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 RNASEH2CQ8TDP1 164 aaKnown RBP6.44□□□□□ -1.38
LINC01238-201ENST00000416204 ARV1Q9H2C2 271 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 C11orf1Q9H5F2 150 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 SLC25A22Q9H936 323 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 RPRMQ9NS64 109 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 CACNG5Q9UF02 275 aa6.44□□□□□ -1.38
LINC01238-201ENST00000416204 RCL1Q9Y2P8 373 aaKnown RBP6.44□□□□□ -1.38
LINC01238-201ENST00000416204 IGKV1D-37A0A075B6S9 117 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 ZFP92A6NM28 416 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 SEC11BP0C7V7 166 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 M6PRP20645 277 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 SULT1A2P50226 295 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 RAB5CP51148 216 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 ERVFC1-1P60608 527 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 VAMP2P63027 116 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 ICAM4Q14773 271 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 SPATA31B1PQ5VZV4 182 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 Q6ZSN1 163 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 FAM219AQ8IW50 185 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 PCNPQ8WW12 178 aaKnown RBP6.43□□□□□ -1.38
LINC01238-201ENST00000416204 RSG1Q9BU20 258 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 PGPEP1Q9NXJ5 209 aa6.43□□□□□ -1.38
LINC01238-201ENST00000416204 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 GAGE12BA1L429 117 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 WRBO00258 174 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 EREGO14944 169 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 PITX3O75364 302 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 GAGE7O76087 117 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 IFNA5P01569 189 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 GAGE12FP0CL80 117 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 GAGE12GP0CL81 117 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 GAGE12IP0CL82 117 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 ZNF266Q14584 549 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 FAM74A1Q5RGS3 127 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 RPL7L1Q6DKI1 246 aaKnown RBP6.42□□□□□ -1.38
LINC01238-201ENST00000416204 ETFRF1Q6IPR1 90 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 RXFP4Q8TDU9 374 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 SMIM8Q96KF7 97 aa6.42□□□□□ -1.38
LINC01238-201ENST00000416204 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.42□□□□□ -1.38
LINC01238-201ENST00000416204 LYRM2Q9NU23 88 aaPredicted RBP6.42□□□□□ -1.38
LINC01238-201ENST00000416204 MRPS16Q9Y3D3 137 aaKnown RBP6.42□□□□□ -1.38
LINC01238-201ENST00000416204 TRAV8-2A0A0B4J237 113 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 A0A1W2PPQ1 181 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 A8MTW9 85 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 MED6O75586 246 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 TSPOP30536 169 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 TAS2R30P59541 319 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 RHOBP62745 196 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms