RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 MRPL36Q9P0J6 103 aaKnown RBP7.62□□□□□ -1.19
LINC01643-201ENST00000412218 UFC1Q9Y3C8 167 aa7.62□□□□□ -1.19
LINC01643-201ENST00000412218 TRBV24-1A0A075B6N3 115 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 IGHV3-35A0A0C4DH35 117 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 RBMY1BA6NDE4 496 aaKnown RBP7.61□□□□□ -1.19
LINC01643-201ENST00000412218 RBMY1EA6NEQ0 496 aaKnown RBP7.61□□□□□ -1.19
LINC01643-201ENST00000412218 OR2T8A6NH00 312 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 F8W735 103 aaPredicted RBP7.61□□□□□ -1.19
LINC01643-201ENST00000412218 K7EIM0 57 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 RBMY1DP0C7P1 496 aaKnown RBP7.61□□□□□ -1.19
LINC01643-201ENST00000412218 LINC00305Q7Z4B0 112 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 LINC01551Q86U37 167 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 OR51G1Q8NGK1 321 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 OR1B1Q8NGR6 318 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 Q8WTZ3 238 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 ZNF503Q96F45 646 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 OR51M1Q9H341 326 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 SRD5A3Q9H8P0 318 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 RETNQ9HD89 108 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 C21orf62Q9NYP8 219 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 MRPL27Q9P0M9 148 aaKnown RBP7.61□□□□□ -1.19
LINC01643-201ENST00000412218 HIGD1AQ9Y241 93 aa7.61□□□□□ -1.19
LINC01643-201ENST00000412218 IGHV3-21A0A0B4J1V1 117 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 TRAV25A0A0B4J276 109 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 OR11H12B2RN74 326 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 IGHV3-48P01763 117 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 GALR1P47211 349 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 MFAP4P55083 255 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 KCNIP4Q6PIL6 250 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 IMMP2LQ96T52 175 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 CHRDL1Q9BU40 450 aa7.6□□□□□ -1.19
LINC01643-201ENST00000412218 GGTLC3B5MD39 225 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 NDUFA4O00483 81 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 TOMM40O96008 361 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 S100A6P06703 90 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 OR10J4P0C629 311 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 ORM2P19652 201 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 S100A7P31151 101 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 ADMP35318 185 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 RPS10P46783 165 aaKnown RBP7.59□□□□□ -1.19
LINC01643-201ENST00000412218 LYZP61626 148 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 Q56UQ5 140 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 PATE2Q6UY27 113 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 ZNF414Q96IQ9 312 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 FAM210BQ96KR6 192 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 TXN2Q99757 166 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 DAZ1Q9NQZ3 744 aaKnown RBP7.59□□□□□ -1.19
LINC01643-201ENST00000412218 TMEM14CQ9P0S9 112 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 RNF24Q9Y225 148 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 URGCP-MRPS24S4R325 110 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 TENM3Q9P273 2699 aa7.59□□□□□ -1.19
LINC01643-201ENST00000412218 TGIF2-C20orf24A0A0A6YYL0 155 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 GNG7O60262 68 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 PFN1P07737 140 aaKnown RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 CXCL1P09341 107 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 RD3LP0DJH9 198 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 PSG1P11464 419 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 FCGR2BP31994 310 aaPredicted RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 RPL35P42766 123 aaKnown RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 GNG4P50150 75 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 CNN1P51911 297 aaKnown RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 TAS2R60P59551 318 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 YPEL3P61236 119 aaPredicted RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 TIGITQ495A1 244 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 MORN5Q5VZ52 161 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 ZFAND6Q6FIF0 208 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 RBPMS2Q6ZRY4 209 aaKnown RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 C2CD4CQ8TF44 421 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 FXYD5Q96DB9 178 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 SFRP2Q96HF1 295 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 SPAG8Q99932 426 aaPredicted RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 FAM110AQ9BQ89 295 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 PYGO2Q9BRQ0 406 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 DERL1Q9BUN8 251 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 GAR1Q9NY12 217 aaKnown RBP7.58□□□□□ -1.2
LINC01643-201ENST00000412218 SORL1Q92673 2214 aa7.58□□□□□ -1.2
LINC01643-201ENST00000412218 DNAH7Q8WXX0 4024 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 TRBV20OR9-2A0A075B6H5 130 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 TRAV9-1A0A075B6T8 112 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 IGHV3OR16-8A0A075B7F1 116 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 TRAV5A0A0B4J249 113 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 HELTA6NFD8 242 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 K7EMT4 169 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 IGKV1-17P01599 117 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 S100A9P06702 114 aaKnown RBP7.57□□□□□ -1.2
LINC01643-201ENST00000412218 CTSGP08311 255 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 PYYP10082 97 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 CRYBB3P26998 211 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 SUMO1P63165 101 aaKnown RBP7.57□□□□□ -1.2
LINC01643-201ENST00000412218 RELQ04864 619 aaPredicted RBP7.57□□□□□ -1.2
LINC01643-201ENST00000412218 SMUG1Q53HV7 270 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 CENPWQ5EE01 88 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 ZFP82Q8N141 532 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 OR10G8Q8NGN5 311 aa7.57□□□□□ -1.2
LINC01643-201ENST00000412218 SAV1Q9H4B6 383 aaPredicted RBP7.57□□□□□ -1.2
LINC01643-201ENST00000412218 H3BRN7 92 aa7.56□□□□□ -1.2
LINC01643-201ENST00000412218 PEX7O00628 323 aa7.56□□□□□ -1.2
LINC01643-201ENST00000412218 ZNF207O43670 478 aaKnown RBP7.56□□□□□ -1.2
LINC01643-201ENST00000412218 FAM3BP58499 235 aaPredicted RBP7.56□□□□□ -1.2
LINC01643-201ENST00000412218 RNF125Q96EQ8 232 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms