RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRAV9-1A0A075B6T8 112 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 SPTY2D1-AS1A0A0U1RR47 76 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 A0A1B0GW54 56 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 A0A1B0GX30 115 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 BBIP1A8MTZ0 92 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 C17orf112F2Z3M2 114 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 NME6O75414 186 aaPredicted RBP-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 VPS26AO75436 327 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 VAPBO95292 243 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR2H2O95918 312 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 HLA-DQB2P05538 268 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 CT47B1P0C2W7 299 aaPredicted RBP-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 IL7P13232 177 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 ANXA8P13928 327 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 CD52P31358 61 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 DEKP35659 375 aaKnown RBP-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 DAPP51397 102 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 RPL30P62888 115 aaKnown RBP-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 AARDQ4LEZ3 155 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 GCSAMLQ5JQS6 135 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 CCDC183Q5T5S1 534 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 ANXA8L1Q5VT79 327 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 TPGS2Q68CL5 300 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 HAUS3Q68CZ6 603 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 NUDCD3Q8IVD9 361 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 SERPINA12Q8IW75 414 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 FAM133AQ8N9E0 248 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 PRELID3AQ96N28 172 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 PSME2Q9UL46 239 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 CEP83Q9Y592 693 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 ORC6Q9Y5N6 252 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 MAPKBP1O60336 1514 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 TRAPPC8Q9Y2L5 1435 aa-2.69□□□□□ -2.84
RNU4-88P-201ENST00000411220 NRXN1Q9ULB1 1477 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 ABCA3Q99758 1704 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 CTXND1A0A1B0GTU2 59 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 A6NDN8 102 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 FAM183AA6NL82 134 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 LINC01619G3V211 115 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 EIF3FO00303 357 aaPredicted RBP-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 CST4P01036 141 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 EIF2S1P05198 315 aaKnown RBP-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 STAG3L2P0CL84 134 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 STAG3L3P0CL85 134 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 SAA1P0DJI8 122 aaPredicted RBP-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 UQCRBP14927 111 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 TNNT3P45378 269 aaPredicted RBP-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 RAB25P57735 213 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR10A3P58181 314 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 B2MP61769 119 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 MSMO1Q15800 293 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 HSDL1Q3SXM5 330 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 MIR17HGQ75NE6 70 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 COMMD7Q86VX2 200 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 BPIFA4PQ86YQ2 179 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 STHQ8IWL8 128 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 C20orf196Q8IYI0 205 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 LRRC18Q8N456 261 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 FAM216BQ8N7L0 139 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR4F6Q8NGB9 312 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 RNASEH2CQ8TDP1 164 aaKnown RBP-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 NEK7Q8TDX7 302 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 PTPMT1Q8WUK0 201 aaPredicted RBP-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 C22orf15Q8WYQ4 148 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 C12orf43Q96C57 262 aaKnown RBP-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 ZHX1-C8orf76Q96EF9 292 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 SGTBQ96EQ0 304 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 ABHD14BQ96IU4 210 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 PBDC1Q9BVG4 233 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 CST11Q9H112 138 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 AK3Q9UIJ7 227 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR51B2Q9Y5P1 312 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 WIZO95785 1651 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 DOCK2Q92608 1830 aa-2.7□□□□□ -2.84
RNU4-88P-201ENST00000411220 MED14O60244 1454 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 RAD54L2Q9Y4B4 1467 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 KIF21AQ7Z4S6 1674 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 A0A087X0K7 114 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 A0A087X0M5 115 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 SMKR1H3BMG3 65 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 H3BN98 237 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 GOLIM4O00461 696 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 GAS8O95995 478 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 MT-ATP6P00846 226 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 FAM86B2P0C5J1 330 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR5G3P0C626 314 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 PIRTP0C851 137 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 ORM2P19652 201 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 S100A7P31151 101 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 CDC34P49427 236 aaPredicted RBP-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 FABP6P51161 128 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 MP68P56378 58 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 RHOAP61586 193 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 VSNL1P62760 191 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 WT1-ASQ06250 92 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 DIAPH2-AS1Q14236 149 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 SYCP1Q15431 976 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 C21orf62-AS1Q17RA5 79 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 IFIT1BQ5T764 474 aaKnown RBP-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 RASSF6Q6ZTQ3 369 aa-2.71□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms