RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 RPL7P18124 248 aaKnown RBP10.06□□□□□ -0.8
SMARCB1-203ENST00000407082 MS4A10Q96PG2 267 aa10.06□□□□□ -0.8
SMARCB1-203ENST00000407082 FANCD2OSQ96PS1 177 aa10.06□□□□□ -0.8
SMARCB1-203ENST00000407082 MLST8Q9BVC4 326 aa10.06□□□□□ -0.8
SMARCB1-203ENST00000407082 TRAV34A0A0B4J273 112 aa10.05□□□□□ -0.8
SMARCB1-203ENST00000407082 BMPR1BO00238 502 aa10.05□□□□□ -0.8
SMARCB1-203ENST00000407082 GZMBP10144 247 aa10.05□□□□□ -0.8
SMARCB1-203ENST00000407082 DEFB112Q30KQ8 113 aa10.05□□□□□ -0.8
SMARCB1-203ENST00000407082 ZNF586Q9NXT0 402 aa10.05□□□□□ -0.8
SMARCB1-203ENST00000407082 RABAC1Q9UI14 185 aa10.05□□□□□ -0.8
SMARCB1-203ENST00000407082 RPH3ALQ9UNE2 315 aa10.05□□□□□ -0.8
SMARCB1-203ENST00000407082 PLXNB1O43157 2135 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 A0A1B0GW15 77 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 ZNF253O75346 499 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 GNG5P63218 68 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 FBLN7Q53RD9 439 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 PRR27Q6MZM9 219 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 C19orf35Q6ZS72 473 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 Q8N9W7 124 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 AJUBAQ96IF1 538 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 LINC00479Q96M42 142 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 SAMD10Q9BYL1 202 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 PRSS22Q9GZN4 317 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 FBXL7Q9UJT9 491 aa10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 PRKDCP78527 4128 aaKnown RBP10.04□□□□□ -0.8
SMARCB1-203ENST00000407082 IGHV7-81A0A0B4J1V7 117 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 C19orf71A6NCJ1 209 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 LINC00587B1AMM8 73 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 M0QZ24 198 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 SCGB1D1O95968 90 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 IGLC2P0DOY2 106 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 RAB4AP20338 218 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 TCL1AP56279 114 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 Q6AWC8 147 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 MRPL54Q6P161 138 aaKnown RBP10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 RBPMS2Q6ZRY4 209 aaKnown RBP10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 Q86TA4 180 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 NHLRC2Q8NBF2 726 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 NUP35Q8NFH5 326 aa10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 FAM103A1Q9BTL3 118 aaKnown RBP10.03□□□□□ -0.8
SMARCB1-203ENST00000407082 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 HIGD1CA8MV81 97 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 OR2J3O76001 311 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 CT45A10P0DMU9 189 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 CD24P25063 80 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 HBBP68871 147 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 SAPCD1Q5SSQ6 148 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 ASPHD1Q5U4P2 390 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 LEMD1Q68G75 181 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 DYNAPQ8N1N2 210 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 TMEM256Q8N2U0 113 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 EEF1AKMT3Q96AZ1 226 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 BORCS7Q96B45 105 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 ZNF414Q96IQ9 312 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 MEGF9Q9H1U4 602 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 PRDM13Q9H4Q3 707 aa10.02□□□□□ -0.81
SMARCB1-203ENST00000407082 NPIPB6E9PJ23 425 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 SPINK4O60575 86 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 KLF5Q13887 457 aaPredicted RBP10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 PSG3Q16557 428 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 Q6YL49 198 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 PRNTQ86SH4 94 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 NEU1Q99519 415 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 CLEC5AQ9NY25 188 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 NAGKQ9UJ70 344 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 PSG8Q9UQ74 426 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 MOB4Q9Y3A3 225 aa10.01□□□□□ -0.81
SMARCB1-203ENST00000407082 GRIFINA4D1Z8 144 aa10□□□□□ -0.81
SMARCB1-203ENST00000407082 DIRC3C9JPN6 131 aa10□□□□□ -0.81
SMARCB1-203ENST00000407082 SERF1AO75920 110 aa10□□□□□ -0.81
SMARCB1-203ENST00000407082 FOXA3P55318 350 aaPredicted RBP10□□□□□ -0.81
SMARCB1-203ENST00000407082 RPS20P60866 119 aaKnown RBP10□□□□□ -0.81
SMARCB1-203ENST00000407082 RELQ04864 619 aaPredicted RBP10□□□□□ -0.81
SMARCB1-203ENST00000407082 RIGQ13278 110 aa10□□□□□ -0.81
SMARCB1-203ENST00000407082 SIGLEC15Q6ZMC9 328 aa10□□□□□ -0.81
SMARCB1-203ENST00000407082 KCNS1Q96KK3 526 aa10□□□□□ -0.81
SMARCB1-203ENST00000407082 GNB4Q9HAV0 340 aa10□□□□□ -0.81
SMARCB1-203ENST00000407082 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 ZNF705FA8MVS1 300 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 M0QZK8 103 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 MRPS12O15235 138 aaKnown RBP9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 HOXA3O43365 443 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 IGHV4-59P01825 116 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 ZNF705DP0CH99 300 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 ZNF705BP0CI00 300 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 EGR2P11161 476 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 DDTP30046 118 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 SRIP30626 198 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 LBHQ53QV2 105 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 C1orf194Q5T5A4 169 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 WFDC12Q8WWY7 111 aa9.99□□□□□ -0.81
SMARCB1-203ENST00000407082 FAM223BA6NKX1 122 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 A8MWP6 167 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 H3BUA1 57 aa9.98□□□□□ -0.81
SMARCB1-203ENST00000407082 CHEK1O14757 476 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms