RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 RNASE1P07998 156 aaKnown RBP8.96□□□□□ -0.97
SKA3-203ENST00000400018 KLHL30-AS1Q8NEE0 82 aa8.96□□□□□ -0.97
SKA3-203ENST00000400018 LINC00479Q96M42 142 aa8.96□□□□□ -0.97
SKA3-203ENST00000400018 SMDT1Q9H4I9 107 aa8.96□□□□□ -0.97
SKA3-203ENST00000400018 SRD5A3Q9H8P0 318 aa8.96□□□□□ -0.97
SKA3-203ENST00000400018 TIMM9Q9Y5J7 89 aa8.96□□□□□ -0.97
SKA3-203ENST00000400018 CTXND1A0A1B0GTU2 59 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 SLC17A3O00476 420 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 HYPMO75409 117 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 RANP62826 216 aaKnown RBP8.96□□□□□ -0.98
SKA3-203ENST00000400018 UBE2V1Q13404 147 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 FUT9Q9Y231 359 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 AGRNO00468 2067 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 GNG5P63218 68 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 EXOC3-AS1Q8N2X6 119 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 RNF114Q9Y508 228 aa8.96□□□□□ -0.98
SKA3-203ENST00000400018 CRIP2P52943 208 aaPredicted RBP8.95□□□□□ -0.98
SKA3-203ENST00000400018 OR11H1Q8NG94 326 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 RNF2Q99496 336 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 STAG3L2P0CL84 134 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 STAG3L3P0CL85 134 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 RHOBP62745 196 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 PRIMA1Q86XR5 153 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 OR4C5Q8NGB2 326 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 ORAOV1Q8WV07 137 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 HIGD1AQ9Y241 93 aa8.95□□□□□ -0.98
SKA3-203ENST00000400018 B4DEV8 164 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 NUPR1O60356 82 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 TOMM40O96008 361 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 NPPCP23582 126 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 GCHFRP30047 84 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
SKA3-203ENST00000400018 TMEM256Q8N2U0 113 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 RPL11P62913 178 aaKnown RBP8.94□□□□□ -0.98
SKA3-203ENST00000400018 WFDC3Q8IUB2 231 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 RNF182Q8N6D2 247 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 OR4F5Q8NH21 305 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 OR4F4Q96R69 305 aa8.94□□□□□ -0.98
SKA3-203ENST00000400018 TRAV34A0A0B4J273 112 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 M0R3E3 92 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 ATP5IP56385 69 aaPredicted RBP8.93□□□□□ -0.98
SKA3-203ENST00000400018 SLC35B1P78383 322 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 Q8N2B8 174 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 VN1R17PQ8TDU5 208 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 MBD3L1Q8WWY6 194 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 RPUSD4Q96CM3 377 aaKnown RBP8.93□□□□□ -0.98
SKA3-203ENST00000400018 TMEM242Q9NWH2 141 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 MRPL27Q9P0M9 148 aaKnown RBP8.93□□□□□ -0.98
SKA3-203ENST00000400018 PEF1Q9UBV8 284 aaKnown RBP8.93□□□□□ -0.98
SKA3-203ENST00000400018 NBEAL2Q6ZNJ1 2754 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 WI2-2373I1.2A0A1W2PRP0 233 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 FNDC10F2Z333 226 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 HOXD3P31249 432 aaPredicted RBP8.93□□□□□ -0.98
SKA3-203ENST00000400018 BMI1P35226 326 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 SUMO1P63165 101 aaKnown RBP8.93□□□□□ -0.98
SKA3-203ENST00000400018 RPL19P84098 196 aaKnown RBP8.93□□□□□ -0.98
SKA3-203ENST00000400018 NHLRC2Q8NBF2 726 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 PAXXQ9BUH6 204 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 ZNF586Q9NXT0 402 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 SMAD5-AS1Q9Y6J3 95 aa8.93□□□□□ -0.98
SKA3-203ENST00000400018 TRBV7-1A0A0A6YYK4 115 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 FAM223BA6NKX1 122 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 GGTLC3B5MD39 225 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 C8orf88P0DMB2 117 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 RPEL1Q2QD12 228 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 FAM90A2PQ658T7 463 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 FAM223AQ8IWN6 122 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 TMEM160Q9NX00 188 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.92□□□□□ -0.98
SKA3-203ENST00000400018 F6UZH7 168 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 ZNF506Q5JVG8 444 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 OR8I2Q8N0Y5 310 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 WFDC12Q8WWY7 111 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 FXYD5Q96DB9 178 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 VAMP8Q9BV40 100 aa8.92□□□□□ -0.98
SKA3-203ENST00000400018 TECRQ9NZ01 308 aaKnown RBP8.92□□□□□ -0.98
SKA3-203ENST00000400018 NOTCH1P46531 2555 aa8.91□□□□□ -0.98
SKA3-203ENST00000400018 TRAV8-1A0A0A6YYK1 113 aa8.91□□□□□ -0.98
SKA3-203ENST00000400018 PFN1P07737 140 aaKnown RBP8.91□□□□□ -0.98
SKA3-203ENST00000400018 ERASQ7Z444 233 aa8.91□□□□□ -0.98
SKA3-203ENST00000400018 LINC01551Q86U37 167 aa8.91□□□□□ -0.98
SKA3-203ENST00000400018 DLX4Q92988 240 aaPredicted RBP8.91□□□□□ -0.98
SKA3-203ENST00000400018 TMEM183BQ1AE95 376 aa8.91□□□□□ -0.98
SKA3-203ENST00000400018 TMEM86BQ8N661 226 aa8.91□□□□□ -0.98
SKA3-203ENST00000400018 RAX2Q96IS3 184 aa8.91□□□□□ -0.98
SKA3-203ENST00000400018 C11orf94C9JXX5 98 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 BCL2P10415 239 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 GP9P14770 177 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 CRYBB3P26998 211 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 YPEL3P61236 119 aaPredicted RBP8.9□□□□□ -0.98
SKA3-203ENST00000400018 OCIAD2Q56VL3 154 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 SDF2L1Q9HCN8 221 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 RABAC1Q9UI14 185 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 LOC102723971A0A1B0GUV8 181 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 H3BRN7 92 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms