RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TP53TG1Q9Y2A0 90 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV4-28A0A0C4DH34 117 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV3-23P01764 117 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 C14orf178Q8N769 122 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 COL2A1P02458 1487 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 C1orf100Q5SVJ3 147 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 M0R1W7 72 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 NGFRP08138 427 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 COL16A1Q07092 1604 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 STRCP1A6NGW2 1772 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 STRCQ7RTU9 1775 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 A0A0U1RQS6 177 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 CELA2BP08218 269 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 SAA2-SAA4A0A096LPE2 208 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 SAA2P0DJI9 122 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 B9D2Q9BPU9 175 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 C7orf69Q9H7B7 122 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 EFNB3Q15768 340 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 MON2Q7Z3U7 1717 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 TRBV5-7A0A0A0MS05 114 aa7.07□□□□□ -1.28
CACNA1C-220ENST00000399655 FIZ1Q96SL8 496 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 PRB1P04280 392 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 SIGLEC8Q9NYZ4 499 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 G3V4G9 280 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 ZNF134P52741 427 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 H2BFSP57053 126 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 C3orf36Q3SXR2 165 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 KLF14Q8TD94 323 aaPredicted RBP7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 TRAV40A0A0B4J280 105 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 H0Y8X5 98 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 MRPS36P82909 103 aaKnown RBP7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 Q6ZWC4 215 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 FN1P02751 2386 aaKnown RBP7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 H0YIZ8 118 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 LYZL1Q6UWQ5 148 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 FBLIM1Q8WUP2 373 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 HCSTQ9UBK5 93 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 TLN2Q9Y4G6 2542 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 ATP6V0E2Q8NHE4 81 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 RNF5Q99942 180 aa7.06□□□□□ -1.28
CACNA1C-220ENST00000399655 PRSS46E5RG02 174 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 GAFA1Q96PS6 74 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 NRTNQ99748 197 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 PTPRFP10586 1907 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 H3BT86 120 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 CD300CQ08708 224 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 C11orf44Q8N8P7 122 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 TMEM75Q8N9X5 138 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 IGKV6-21A0A0C4DH24 114 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 C15orf32Q32M92 178 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 FAM219BQ5XKK7 198 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 FAM110AQ9BQ89 295 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 TRBV5-4A0A0C4DH59 114 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 LIMS1P48059 325 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 RPL18AQ02543 176 aaKnown RBP7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 LCNL1Q6ZST4 164 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 DMRTC2Q8IXT2 367 aaPredicted RBP7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 OCC1Q8TAD7 63 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 SRSF8Q9BRL6 282 aaKnown RBP7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 BPY2O14599 106 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 PRDM6Q9NQX0 595 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 RHOHQ15669 191 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 Q8N9L7 120 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 TTTY12Q9BZ98 90 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 LRP6O75581 1613 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 COL3A1P02461 1466 aaPredicted RBP7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 FAM222AQ5U5X8 452 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 MCRIP2Q9BUT9 160 aaKnown RBP7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 TANC1Q9C0D5 1861 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 SIPA1L1O43166 1804 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 J3QQQ9 107 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 C3orf79P0CE67 100 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 CRYGSP22914 178 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 COX7B2Q8TF08 81 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 PYGO2Q9BRQ0 406 aa7.05□□□□□ -1.28
CACNA1C-220ENST00000399655 A0A1B0GTL3 188 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 C8orf82Q6P1X6 216 aaPredicted RBP7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 Q8N8P6 123 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 NTN5Q8WTR8 489 aaPredicted RBP7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 NTN3O00634 580 aaPredicted RBP7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 SPSB2Q99619 263 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 OOSP1A8MZH6 123 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 CFC1BP0CG36 223 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 CFC1P0CG37 223 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 TMEM219Q86XT9 240 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 DYNAPQ8N1N2 210 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 FXYD7P58549 80 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV2-70DA0A0C4DH43 119 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 ANGP03950 147 aaKnown RBP7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 Q8N1Y9 231 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 SIGLEC12Q96PQ1 595 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 NDUFA4O00483 81 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 RPL15P61313 204 aaKnown RBP7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 LILRA3Q8N6C8 439 aaPredicted RBP7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 PPP1R3EQ9H7J1 279 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 DEFB130BP0DP73 79 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 DEFB130AP0DP74 79 aa7.04□□□□□ -1.28
CACNA1C-220ENST00000399655 Q0VG73 95 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms