RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CDC42EP3Q9UKI2 254 aa11.83□□□□□ -0.52
COL25A1-201ENST00000399126 HINT1P49773 126 aaPredicted RBP11.82□□□□□ -0.52
COL25A1-201ENST00000399126 TAS2R45P59539 299 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 UBE2L3P68036 154 aaKnown RBP11.82□□□□□ -0.52
COL25A1-201ENST00000399126 PQLC2Q6ZP29 291 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 CIARTQ8N365 385 aaPredicted RBP11.82□□□□□ -0.52
COL25A1-201ENST00000399126 WFDC11Q8NEX6 87 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 VN1R17PQ8TDU5 208 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 MYO9AB2RTY4 2548 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 GGTLC3B5MD39 225 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 PAFAH1B2P68402 229 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 MCRIP2Q9BUT9 160 aaKnown RBP11.82□□□□□ -0.52
COL25A1-201ENST00000399126 FBXL7Q9UJT9 491 aa11.82□□□□□ -0.52
COL25A1-201ENST00000399126 MRPS16Q9Y3D3 137 aaKnown RBP11.82□□□□□ -0.52
COL25A1-201ENST00000399126 A6NDX4 124 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 GNG7O60262 68 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 HYPMO75409 117 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 BLCAPP62952 87 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 Q56UQ5 140 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 Q6ZWC4 215 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
COL25A1-201ENST00000399126 C21orf62Q9NYP8 219 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 G3V4G9 280 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 CTRLP40313 264 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 RAB9AP51151 201 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 TPPP2P59282 170 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 ADIRFQ15847 76 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 NF1P21359 2839 aa11.81□□□□□ -0.52
COL25A1-201ENST00000399126 IGHV3-35A0A0C4DH35 117 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 H3BTX0 84 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 PDE6DO43924 150 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 IGHV4-59P01825 116 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 IGLC2P0DOY2 106 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 IGLC3P0DOY3 106 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 SPATA45Q537H7 98 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 C16orf82Q7Z2V1 217 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 PAXXQ9BUH6 204 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 TMEM167BQ9NRX6 74 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 GAGE12BA1L429 117 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 C15orf32Q32M92 178 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 CMTM2Q8TAZ6 248 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 FXYD5Q96DB9 178 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 OR5B12Q96R08 314 aa11.8□□□□□ -0.52
COL25A1-201ENST00000399126 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
COL25A1-201ENST00000399126 MBD6Q96DN6 1003 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 ZNF586Q9NXT0 402 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 NAT8Q9UHE5 227 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 IGHV3OR16-8A0A075B7F1 116 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 IL4P05112 153 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 PLP1P60201 277 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 ZNF491Q8N8L2 437 aa11.79□□□□□ -0.52
COL25A1-201ENST00000399126 RNASEKQ6P5S7 137 aaKnown RBP11.78□□□□□ -0.52
COL25A1-201ENST00000399126 BLNKQ8WV28 456 aa11.78□□□□□ -0.52
COL25A1-201ENST00000399126 THYN1Q9P016 225 aa11.78□□□□□ -0.52
COL25A1-201ENST00000399126 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
COL25A1-201ENST00000399126 J3QLI3 93 aa11.78□□□□□ -0.52
COL25A1-201ENST00000399126 CRYBB3P26998 211 aa11.78□□□□□ -0.52
COL25A1-201ENST00000399126 ADMP35318 185 aa11.78□□□□□ -0.52
COL25A1-201ENST00000399126 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
COL25A1-201ENST00000399126 SLC25A39Q9BZJ4 359 aaPredicted RBP11.78□□□□□ -0.52
COL25A1-201ENST00000399126 ANK3Q12955 4377 aaKnown RBP11.78□□□□□ -0.52
COL25A1-201ENST00000399126 MTORP42345 2549 aa11.77□□□□□ -0.52
COL25A1-201ENST00000399126 CTSGP08311 255 aa11.77□□□□□ -0.52
COL25A1-201ENST00000399126 KLHDC1Q8N7A1 406 aa11.77□□□□□ -0.52
COL25A1-201ENST00000399126 TRBV9A0A0B4J1U6 114 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 TRAV41A0A0B4J266 112 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 ZNF561-AS1K7EIQ3 104 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 TYMSP04818 313 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 GP9P14770 177 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 CD33P20138 364 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 GPR183P32249 361 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 GALR1P47211 349 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 C19orf54Q5BKX5 351 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 CT83Q5H943 113 aa11.77□□□□□ -0.53
COL25A1-201ENST00000399126 TSPOP30536 169 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 ZNF414Q96IQ9 312 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 SS18L2Q9UHA2 77 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 NUPR1O60356 82 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 FSHBP01225 129 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 OR1N2Q8NGR9 330 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
COL25A1-201ENST00000399126 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 IL17RELQ6ZVW7 336 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 H7BYZ3 331 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 PRB4P10163 310 aaPredicted RBP11.75□□□□□ -0.53
COL25A1-201ENST00000399126 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 C11orf52Q96A22 123 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
COL25A1-201ENST00000399126 WI2-2373I1.2A0A1W2PRP0 233 aa11.74□□□□□ -0.53
COL25A1-201ENST00000399126 IGHG2P01859 326 aa11.74□□□□□ -0.53
COL25A1-201ENST00000399126 ESDP10768 282 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms