RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ARL14EPLP0DKL9 152 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 PRB4P10163 310 aaPredicted RBP14.07□□□□□ -0.16
HOXA9-202ENST00000396345 C4BPBP20851 252 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 NUTF2P61970 127 aaKnown RBP14.07□□□□□ -0.16
HOXA9-202ENST00000396345 DEFB135Q30KP9 77 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 EXOC3-AS1Q8N2X6 119 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 C9orf62Q8N4C0 152 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 OR8A1Q8NGG7 326 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 STOML3Q8TAV4 291 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 PHYHIPLQ96FC7 376 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 CLUHP3Q96NS8 147 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 RCHY1Q96PM5 261 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 AAMDCQ9H7C9 122 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 PRELID1Q9Y255 219 aa14.07□□□□□ -0.16
HOXA9-202ENST00000396345 HUWE1Q7Z6Z7 4374 aaKnown RBP14.07□□□□□ -0.16
HOXA9-202ENST00000396345 CTXND1A0A1B0GTU2 59 aa14.06□□□□□ -0.16
HOXA9-202ENST00000396345 HIST1H1AQ02539 215 aaPredicted RBP14.06□□□□□ -0.16
HOXA9-202ENST00000396345 SSX7Q7RTT5 188 aa14.06□□□□□ -0.16
HOXA9-202ENST00000396345 MRPL53Q96EL3 112 aaKnown RBP14.06□□□□□ -0.16
HOXA9-202ENST00000396345 PRAC2D3DTV9 90 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 SPRY2O43597 315 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 CXorf1O96002 111 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 GIG44P09565 113 aaPredicted RBP14.05□□□□□ -0.16
HOXA9-202ENST00000396345 CNN1P51911 297 aaKnown RBP14.05□□□□□ -0.16
HOXA9-202ENST00000396345 RANP62826 216 aaKnown RBP14.05□□□□□ -0.16
HOXA9-202ENST00000396345 ICAM4Q14773 271 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 ZNF726P1Q15940 193 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 LYPD1Q8N2G4 141 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 RNF183Q96D59 192 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 OVOL2Q9BRP0 275 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 PLA2G2EQ9NZK7 142 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 TP53TG1Q9Y2A0 90 aa14.05□□□□□ -0.16
HOXA9-202ENST00000396345 A8MTW9 85 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 UMAD1C9J7I0 102 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 M0R3E3 92 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 GCHFRP30047 84 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 SLC51BQ86UW2 128 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 OR10J6PQ8NGY7 276 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 TMED6Q8WW62 240 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 Q9H3A6 140 aa14.04□□□□□ -0.16
HOXA9-202ENST00000396345 FXYD7P58549 80 aa14.03□□□□□ -0.16
HOXA9-202ENST00000396345 EIF5AL1Q6IS14 154 aaKnown RBP14.03□□□□□ -0.16
HOXA9-202ENST00000396345 C1QTNF4Q9BXJ3 329 aa14.03□□□□□ -0.16
HOXA9-202ENST00000396345 SLC35B3Q9H1N7 401 aa14.03□□□□□ -0.16
HOXA9-202ENST00000396345 STAB2Q8WWQ8 2551 aa14.03□□□□□ -0.16
HOXA9-202ENST00000396345 FHITP49789 147 aa14.02□□□□□ -0.17
HOXA9-202ENST00000396345 NKX2-5P52952 324 aaPredicted RBP14.02□□□□□ -0.17
HOXA9-202ENST00000396345 AMTNQ6UX39 209 aa14.02□□□□□ -0.17
HOXA9-202ENST00000396345 IQCF2Q8IXL9 164 aa14.02□□□□□ -0.17
HOXA9-202ENST00000396345 SUN5Q8TC36 379 aa14.02□□□□□ -0.17
HOXA9-202ENST00000396345 TMEM167BQ9NRX6 74 aa14.02□□□□□ -0.17
HOXA9-202ENST00000396345 PPP1R14DQ9NXH3 145 aa14.02□□□□□ -0.17
HOXA9-202ENST00000396345 XCL2Q9UBD3 114 aa14.02□□□□□ -0.17
HOXA9-202ENST00000396345 DPPA3Q6W0C5 159 aa14.01□□□□□ -0.17
HOXA9-202ENST00000396345 FAM213BQ8TBF2 198 aa14.01□□□□□ -0.17
HOXA9-202ENST00000396345 OTORQ9NRC9 128 aa14.01□□□□□ -0.17
HOXA9-202ENST00000396345 MAP1LC3B2A6NCE7 125 aa14□□□□□ -0.17
HOXA9-202ENST00000396345 PGPA6NDG6 321 aa14□□□□□ -0.17
HOXA9-202ENST00000396345 CSN1S1P47710 185 aa14□□□□□ -0.17
HOXA9-202ENST00000396345 FGF8P55075 233 aaPredicted RBP14□□□□□ -0.17
HOXA9-202ENST00000396345 FAM74A1Q5RGS3 127 aa14□□□□□ -0.17
HOXA9-202ENST00000396345 MAP1LC3BQ9GZQ8 125 aa14□□□□□ -0.17
HOXA9-202ENST00000396345 NPIPB6E9PJ23 425 aa13.99□□□□□ -0.17
HOXA9-202ENST00000396345 CSNK1G2-AS1Q8NCQ2 148 aa13.99□□□□□ -0.17
HOXA9-202ENST00000396345 RARRES2Q99969 163 aa13.99□□□□□ -0.17
HOXA9-202ENST00000396345 TMPRSS5Q9H3S3 457 aa13.99□□□□□ -0.17
HOXA9-202ENST00000396345 BOLA2-SMG1P6H3BVE0 249 aa13.98□□□□□ -0.17
HOXA9-202ENST00000396345 AMBPP02760 352 aa13.98□□□□□ -0.17
HOXA9-202ENST00000396345 SPINK13Q1W4C9 94 aa13.98□□□□□ -0.17
HOXA9-202ENST00000396345 OR11H2Q8NH07 326 aa13.98□□□□□ -0.17
HOXA9-202ENST00000396345 RXFP4Q8TDU9 374 aa13.98□□□□□ -0.17
HOXA9-202ENST00000396345 IGKV2-40A0A087WW87 121 aaPredicted RBP13.97□□□□□ -0.17
HOXA9-202ENST00000396345 M0R2Z0 102 aa13.97□□□□□ -0.17
HOXA9-202ENST00000396345 IGKV2D-40P01614 121 aaPredicted RBP13.97□□□□□ -0.17
HOXA9-202ENST00000396345 RAB5CP51148 216 aa13.97□□□□□ -0.17
HOXA9-202ENST00000396345 ERCC8Q13216 396 aa13.97□□□□□ -0.17
HOXA9-202ENST00000396345 CMTM2Q8TAZ6 248 aa13.97□□□□□ -0.17
HOXA9-202ENST00000396345 SFT2D1Q8WV19 159 aa13.97□□□□□ -0.17
HOXA9-202ENST00000396345 MBD3L1Q8WWY6 194 aa13.97□□□□□ -0.17
HOXA9-202ENST00000396345 LINC00477Q96M19 166 aa13.97□□□□□ -0.17
HOXA9-202ENST00000396345 H2AFB1P0C5Y9 115 aa13.96□□□□□ -0.17
HOXA9-202ENST00000396345 CT45A10P0DMU9 189 aa13.96□□□□□ -0.17
HOXA9-202ENST00000396345 AGPAT4-IT1Q9H0P7 198 aa13.96□□□□□ -0.17
HOXA9-202ENST00000396345 BOLA1Q9Y3E2 137 aa13.96□□□□□ -0.17
HOXA9-202ENST00000396345 DIRC3C9JPN6 131 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 SLC25A5P05141 298 aaKnown RBP13.95□□□□□ -0.18
HOXA9-202ENST00000396345 TSPOP30536 169 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 SULT1A2P50226 295 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 C9orf47Q6ZRZ4 202 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 ARL6IP6Q8N6S5 226 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 IGF2BP2-AS1Q96M15 143 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 ODF3Q96PU9 254 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 VGLL1Q99990 258 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 RPH3ALQ9UNE2 315 aa13.95□□□□□ -0.18
HOXA9-202ENST00000396345 A0A1W2PRE2 83 aa13.94□□□□□ -0.18
HOXA9-202ENST00000396345 RBAKDNA6NC62 111 aa13.94□□□□□ -0.18
HOXA9-202ENST00000396345 ZNF705EA8MWA4 302 aaPredicted RBP13.94□□□□□ -0.18
HOXA9-202ENST00000396345 CRXO43186 299 aaPredicted RBP13.94□□□□□ -0.18
HOXA9-202ENST00000396345 INSP01308 110 aa13.94□□□□□ -0.18
HOXA9-202ENST00000396345 LEPP41159 167 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms