RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CDC34P49427 236 aaPredicted RBP14.49□□□□□ -0.09
SNCA-203ENST00000394986 SERF2P84101 59 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 PDE6HQ13956 83 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 AKAP14Q86UN6 197 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 CSNK1G2-AS1Q8NCQ2 148 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 OR11H2Q8NH07 326 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 CLUHP3Q96NS8 147 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 A0A0D9SG52 128 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 BCL2L11O43521 198 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 DUSP14O95147 198 aaKnown RBP14.49□□□□□ -0.09
SNCA-203ENST00000394986 TMEM41BQ5BJD5 291 aa14.49□□□□□ -0.09
SNCA-203ENST00000394986 A0A0J9YWU9 116 aa14.48□□□□□ -0.09
SNCA-203ENST00000394986 M0R2Z0 102 aa14.48□□□□□ -0.09
SNCA-203ENST00000394986 ICAM4Q14773 271 aa14.48□□□□□ -0.09
SNCA-203ENST00000394986 SSX7Q7RTT5 188 aa14.48□□□□□ -0.09
SNCA-203ENST00000394986 RAB24Q969Q5 203 aa14.48□□□□□ -0.09
SNCA-203ENST00000394986 MBP02144 154 aa14.47□□□□□ -0.09
SNCA-203ENST00000394986 ARL14EPLP0DKL9 152 aa14.47□□□□□ -0.09
SNCA-203ENST00000394986 SPINK13Q1W4C9 94 aa14.47□□□□□ -0.09
SNCA-203ENST00000394986 TMUB2Q71RG4 321 aa14.47□□□□□ -0.09
SNCA-203ENST00000394986 ZNF471Q9BX82 626 aaPredicted RBP14.47□□□□□ -0.09
SNCA-203ENST00000394986 C1QTNF4Q9BXJ3 329 aa14.47□□□□□ -0.09
SNCA-203ENST00000394986 KANTRA0A1W2PQU2 76 aa14.46□□□□□ -0.09
SNCA-203ENST00000394986 C1QBP02746 253 aa14.46□□□□□ -0.09
SNCA-203ENST00000394986 RANP62826 216 aaKnown RBP14.46□□□□□ -0.09
SNCA-203ENST00000394986 MRPL53Q96EL3 112 aaKnown RBP14.46□□□□□ -0.09
SNCA-203ENST00000394986 AAMDCQ9H7C9 122 aa14.46□□□□□ -0.09
SNCA-203ENST00000394986 DEFB4AO15263 64 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 PFDN1O60925 122 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 STAG3L2P0CL84 134 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 STAG3L3P0CL85 134 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 ZNF726P1Q15940 193 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 PQLC2Q6ZP29 291 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 OR10J6PQ8NGY7 276 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 X6R8D5 127 aa14.45□□□□□ -0.1
SNCA-203ENST00000394986 IGHV3OR16-12A0A075B7B8 117 aa14.44□□□□□ -0.1
SNCA-203ENST00000394986 LGALSLQ3ZCW2 172 aaPredicted RBP14.44□□□□□ -0.1
SNCA-203ENST00000394986 AKR1C8PQ5T2L2 129 aa14.44□□□□□ -0.1
SNCA-203ENST00000394986 BAP18Q8IXM2 172 aa14.44□□□□□ -0.1
SNCA-203ENST00000394986 ACTR3CQ9C0K3 210 aaPredicted RBP14.44□□□□□ -0.1
SNCA-203ENST00000394986 Q9H3A6 140 aa14.44□□□□□ -0.1
SNCA-203ENST00000394986 DNAH7Q8WXX0 4024 aa14.44□□□□□ -0.1
SNCA-203ENST00000394986 TRAV12-2A0A075B6T6 113 aa14.43□□□□□ -0.1
SNCA-203ENST00000394986 IGKV2-40A0A087WW87 121 aaPredicted RBP14.43□□□□□ -0.1
SNCA-203ENST00000394986 ZNF705EA8MWA4 302 aaPredicted RBP14.43□□□□□ -0.1
SNCA-203ENST00000394986 BOLA2-SMG1P6H3BVE0 249 aa14.43□□□□□ -0.1
SNCA-203ENST00000394986 IGKV2D-40P01614 121 aaPredicted RBP14.43□□□□□ -0.1
SNCA-203ENST00000394986 PPP1R14DQ9NXH3 145 aa14.43□□□□□ -0.1
SNCA-203ENST00000394986 PLA2G2EQ9NZK7 142 aa14.43□□□□□ -0.1
SNCA-203ENST00000394986 PRELID1Q9Y255 219 aa14.43□□□□□ -0.1
SNCA-203ENST00000394986 NPIPB6E9PJ23 425 aa14.42□□□□□ -0.1
SNCA-203ENST00000394986 CRXO43186 299 aaPredicted RBP14.42□□□□□ -0.1
SNCA-203ENST00000394986 ERCC8Q13216 396 aa14.42□□□□□ -0.1
SNCA-203ENST00000394986 C1orf158Q8N1D5 194 aa14.42□□□□□ -0.1
SNCA-203ENST00000394986 Q8NAQ8 132 aa14.42□□□□□ -0.1
SNCA-203ENST00000394986 MUC7Q8TAX7 377 aa14.42□□□□□ -0.1
SNCA-203ENST00000394986 IGHV4-28A0A0C4DH34 117 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 GCHFRP30047 84 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 KIR3DS1Q14943 382 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 CTXND1A0A1B0GTU2 59 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 CT45A10P0DMU9 189 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 ZNF705AQ6ZN79 300 aaPredicted RBP14.41□□□□□ -0.1
SNCA-203ENST00000394986 IQCF2Q8IXL9 164 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 HYLS1Q96M11 299 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 IGF2BP2-AS1Q96M15 143 aa14.41□□□□□ -0.1
SNCA-203ENST00000394986 RBMY1A1P0DJD3 496 aaKnown RBP14.4□□□□□ -0.1
SNCA-203ENST00000394986 RBMY1CP0DJD4 496 aa14.4□□□□□ -0.1
SNCA-203ENST00000394986 FHITP49789 147 aa14.4□□□□□ -0.1
SNCA-203ENST00000394986 RBMY1FQ15415 496 aaKnown RBP14.4□□□□□ -0.1
SNCA-203ENST00000394986 ZFAND6Q6FIF0 208 aa14.4□□□□□ -0.1
SNCA-203ENST00000394986 LYPD1Q8N2G4 141 aa14.4□□□□□ -0.1
SNCA-203ENST00000394986 VGLL1Q99990 258 aa14.4□□□□□ -0.1
SNCA-203ENST00000394986 J3KRW8 73 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 CXorf1O96002 111 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 INSP01308 110 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 AMBPP02760 352 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 SEC11BP0C7V7 166 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 MIFP14174 115 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 FGF8P55075 233 aaPredicted RBP14.39□□□□□ -0.11
SNCA-203ENST00000394986 TMED6Q8WW62 240 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 AGPAT4-IT1Q9H0P7 198 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 C11orf68Q9H3H3 251 aaKnown RBP14.39□□□□□ -0.11
SNCA-203ENST00000394986 TMPRSS5Q9H3S3 457 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 OTORQ9NRC9 128 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 RPH3ALQ9UNE2 315 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 GOLT1BQ9Y3E0 138 aa14.39□□□□□ -0.11
SNCA-203ENST00000394986 PGPA6NDG6 321 aa14.38□□□□□ -0.11
SNCA-203ENST00000394986 TPT1P13693 172 aaKnown RBP14.38□□□□□ -0.11
SNCA-203ENST00000394986 CDKN1BP46527 198 aa14.38□□□□□ -0.11
SNCA-203ENST00000394986 IL17DQ8TAD2 202 aa14.38□□□□□ -0.11
SNCA-203ENST00000394986 PRM2P04554 102 aa14.37□□□□□ -0.11
SNCA-203ENST00000394986 CSN1S1P47710 185 aa14.37□□□□□ -0.11
SNCA-203ENST00000394986 ZFP69Q49AA0 526 aa14.37□□□□□ -0.11
SNCA-203ENST00000394986 C9orf62Q8N4C0 152 aa14.37□□□□□ -0.11
SNCA-203ENST00000394986 STOML3Q8TAV4 291 aa14.37□□□□□ -0.11
SNCA-203ENST00000394986 SUN5Q8TC36 379 aa14.37□□□□□ -0.11
SNCA-203ENST00000394986 TMEM208Q9BTX3 173 aa14.37□□□□□ -0.11
SNCA-203ENST00000394986 MAP1LC3B2A6NCE7 125 aa14.36□□□□□ -0.11
SNCA-203ENST00000394986 GNG5P63218 68 aa14.36□□□□□ -0.11
SNCA-203ENST00000394986 EIF5AP63241 154 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms