RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 GPR82Q96P67 336 aa13.8□□□□□ -0.2
UPK3B-203ENST00000394849 SHANK2-AS3Q9BTD1 123 aa13.8□□□□□ -0.2
UPK3B-203ENST00000394849 ARV1Q9H2C2 271 aa13.8□□□□□ -0.2
UPK3B-203ENST00000394849 LINC00588Q9Y4M8 146 aa13.8□□□□□ -0.2
UPK3B-203ENST00000394849 DNAH5Q8TE73 4624 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 COX7A2P2O60397 106 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 ATP5G1P05496 136 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 FGF7P21781 194 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 ATP5G3P48201 142 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 CLINT1Q14677 625 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 Q6ZRG5 221 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 OR5C1Q8NGR4 320 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 UHRF2Q96PU4 802 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 RNF24Q9Y225 148 aa13.79□□□□□ -0.2
UPK3B-203ENST00000394849 DEFB130BP0DP73 79 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 DEFB130AP0DP74 79 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 CXCL3P19876 107 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 FCN2Q15485 313 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 MIC13Q5XKP0 118 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 RSG1Q9BU20 258 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 Q9H8V8 135 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 MBD2Q9UBB5 411 aa13.78□□□□□ -0.2
UPK3B-203ENST00000394849 CBY3A6NI87 242 aa13.77□□□□□ -0.21
UPK3B-203ENST00000394849 F6UB75 175 aa13.77□□□□□ -0.21
UPK3B-203ENST00000394849 INSP01308 110 aa13.77□□□□□ -0.21
UPK3B-203ENST00000394849 RPL7P18124 248 aaKnown RBP13.77□□□□□ -0.21
UPK3B-203ENST00000394849 THAP6Q8TBB0 222 aa13.77□□□□□ -0.21
UPK3B-203ENST00000394849 A0A1W2PPQ1 181 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 MPDU1O75352 247 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 DUSP14O95147 198 aaKnown RBP13.76□□□□□ -0.21
UPK3B-203ENST00000394849 FGL1Q08830 312 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 AMTNQ6UX39 209 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 PATE2Q6UY27 113 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 SSX7Q7RTT5 188 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 LINC00305Q7Z4B0 112 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 OR11H7Q8NGC8 314 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
UPK3B-203ENST00000394849 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
UPK3B-203ENST00000394849 RPL29P47914 159 aaKnown RBP13.75□□□□□ -0.21
UPK3B-203ENST00000394849 OPCMLQ14982 345 aa13.75□□□□□ -0.21
UPK3B-203ENST00000394849 C10orf113Q5VZT2 155 aa13.75□□□□□ -0.21
UPK3B-203ENST00000394849 OR1L4Q8NGR5 311 aa13.75□□□□□ -0.21
UPK3B-203ENST00000394849 Q9H3A6 140 aa13.75□□□□□ -0.21
UPK3B-203ENST00000394849 SLC39A9Q9NUM3 307 aa13.75□□□□□ -0.21
UPK3B-203ENST00000394849 HSPB11Q9Y547 144 aa13.75□□□□□ -0.21
UPK3B-203ENST00000394849 ZNF705GA8MUZ8 300 aaPredicted RBP13.74□□□□□ -0.21
UPK3B-203ENST00000394849 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.74□□□□□ -0.21
UPK3B-203ENST00000394849 PFDN5Q99471 154 aa13.74□□□□□ -0.21
UPK3B-203ENST00000394849 DNAJC4Q9NNZ3 241 aa13.74□□□□□ -0.21
UPK3B-203ENST00000394849 PXMP4Q9Y6I8 212 aa13.74□□□□□ -0.21
UPK3B-203ENST00000394849 INAFM2P0DMQ5 153 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 KRTAP10-2P60368 255 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 TMEM256Q8N2U0 113 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 CHAC2Q8WUX2 184 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 RNF141Q8WVD5 230 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 TMEM37Q8WXS4 190 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 ZNF503Q96F45 646 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 ATP5SQ99766 215 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 NPCDR1Q9BY65 106 aa13.73□□□□□ -0.21
UPK3B-203ENST00000394849 LRRC20Q8TCA0 184 aa13.72□□□□□ -0.21
UPK3B-203ENST00000394849 SMIM3Q9BZL3 60 aa13.72□□□□□ -0.21
UPK3B-203ENST00000394849 KCNIP2Q9NS61 270 aa13.72□□□□□ -0.21
UPK3B-203ENST00000394849 CRXO43186 299 aaPredicted RBP13.71□□□□□ -0.21
UPK3B-203ENST00000394849 GIPP09681 153 aaPredicted RBP13.71□□□□□ -0.21
UPK3B-203ENST00000394849 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
UPK3B-203ENST00000394849 SPINK13Q1W4C9 94 aa13.71□□□□□ -0.21
UPK3B-203ENST00000394849 BPIFA4PQ86YQ2 179 aa13.71□□□□□ -0.21
UPK3B-203ENST00000394849 ASB13Q8WXK3 278 aa13.71□□□□□ -0.21
UPK3B-203ENST00000394849 C20orf173Q96LM9 149 aa13.71□□□□□ -0.21
UPK3B-203ENST00000394849 UPK3BQ9BT76 320 aa13.71□□□□□ -0.21
UPK3B-203ENST00000394849 WDR61Q9GZS3 305 aaKnown RBP13.71□□□□□ -0.21
UPK3B-203ENST00000394849 PLAC8L1A1L4L8 177 aa13.7□□□□□ -0.22
UPK3B-203ENST00000394849 C17orf112F2Z3M2 114 aa13.7□□□□□ -0.22
UPK3B-203ENST00000394849 IFNA5P01569 189 aa13.7□□□□□ -0.22
UPK3B-203ENST00000394849 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
UPK3B-203ENST00000394849 SCGB1C1Q8TD33 95 aa13.7□□□□□ -0.22
UPK3B-203ENST00000394849 C16orf74Q96GX8 76 aa13.7□□□□□ -0.22
UPK3B-203ENST00000394849 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
UPK3B-203ENST00000394849 TIMM8BQ9Y5J9 83 aaPredicted RBP13.7□□□□□ -0.22
UPK3B-203ENST00000394849 A0A087X0K7 114 aa13.69□□□□□ -0.22
UPK3B-203ENST00000394849 M0R2Z0 102 aa13.69□□□□□ -0.22
UPK3B-203ENST00000394849 TAS2R60P59551 318 aa13.69□□□□□ -0.22
UPK3B-203ENST00000394849 MORN5Q5VZ52 161 aa13.69□□□□□ -0.22
UPK3B-203ENST00000394849 ZNF493Q6ZR52 646 aa13.69□□□□□ -0.22
UPK3B-203ENST00000394849 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
UPK3B-203ENST00000394849 PRM2P04554 102 aa13.68□□□□□ -0.22
UPK3B-203ENST00000394849 IGFL4Q6B9Z1 124 aa13.68□□□□□ -0.22
UPK3B-203ENST00000394849 GNPNAT1Q96EK6 184 aaPredicted RBP13.68□□□□□ -0.22
UPK3B-203ENST00000394849 LINC01587Q99440 93 aa13.68□□□□□ -0.22
UPK3B-203ENST00000394849 KRTAP1-5Q9BYS1 174 aa13.68□□□□□ -0.22
UPK3B-203ENST00000394849 BOLA2-SMG1P6H3BVE0 249 aa13.67□□□□□ -0.22
UPK3B-203ENST00000394849 MRPS12O15235 138 aaKnown RBP13.67□□□□□ -0.22
UPK3B-203ENST00000394849 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
UPK3B-203ENST00000394849 AZU1P20160 251 aa13.67□□□□□ -0.22
UPK3B-203ENST00000394849 LCN15Q6UWW0 184 aa13.67□□□□□ -0.22
UPK3B-203ENST00000394849 RNF182Q8N6D2 247 aa13.67□□□□□ -0.22
UPK3B-203ENST00000394849 RXFP4Q8TDU9 374 aa13.67□□□□□ -0.22
UPK3B-203ENST00000394849 TRAV8-2A0A0B4J237 113 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 H3BNG1 76 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms