RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FA2HQ7L5A8 372 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 DEFB125Q8N687 156 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 PRSS3P2Q8NHM4 247 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 ARF6P62330 175 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 VAMP3Q15836 100 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 ZNF493Q6ZR52 646 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 TACC2O95359 2948 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 ARHGAP32A7KAX9 2087 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 TRAV30A0A087WSZ9 112 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 NBR2O15453 112 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 RBX1P62877 108 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 C12orf54Q6X4T0 127 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 OR4C5Q8NGB2 326 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 AKAP6Q13023 2319 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 A0A087X0K7 114 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 IFI27P40305 119 aaPredicted RBP14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 FOXE3Q13461 319 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 C21orf62-AS1Q17RA5 79 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 OR10AG1Q8NH19 301 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 CFHR4Q92496 578 aa14.38□□□□□ -0.11
PCDHA1-202ENST00000394633 A0A096LNJ9 63 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 CSN1S1P47710 185 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 HIST1H1AQ02539 215 aaPredicted RBP14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 LOXL1Q08397 574 aaPredicted RBP14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 LYZL1Q6UWQ5 148 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 HILPDAQ9Y5L2 63 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 LRRK2Q5S007 2527 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 TMEM213A2RRL7 107 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 CT45A10P0DMU9 189 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 COX8AP10176 69 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 RHOGP84095 191 aa14.37□□□□□ -0.11
PCDHA1-202ENST00000394633 UBR5O95071 2799 aaPredicted RBP14.36□□□□□ -0.11
PCDHA1-202ENST00000394633 TMSB15BA0A087X1C1 80 aa14.36□□□□□ -0.11
PCDHA1-202ENST00000394633 OR2T8A6NH00 312 aa14.36□□□□□ -0.11
PCDHA1-202ENST00000394633 GNG7O60262 68 aa14.36□□□□□ -0.11
PCDHA1-202ENST00000394633 PCP4P48539 62 aa14.36□□□□□ -0.11
PCDHA1-202ENST00000394633 LY6G5BQ8NDX9 201 aa14.36□□□□□ -0.11
PCDHA1-202ENST00000394633 RAB1BQ9H0U4 201 aa14.36□□□□□ -0.11
PCDHA1-202ENST00000394633 SERTM2A0A1B0GWG4 89 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 D6R8Y8 96 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 C19orf84I3L1E1 186 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 NDUFA3O95167 84 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 PDE6HQ13956 83 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 C2orf91Q6ZV80 131 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 AAMDCQ9H7C9 122 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 SIGLEC8Q9NYZ4 499 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 LOC389332A0A1B0GUA5 103 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 TMEM189A5PLL7 270 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 SH2D1AO60880 128 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 ZNF672Q499Z4 452 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 NPBQ8NG41 125 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 FANCD2OSQ96PS1 177 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 DPM3Q9P2X0 92 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 U3KQK5 164 aa14.35□□□□□ -0.11
PCDHA1-202ENST00000394633 KMT2BQ9UMN6 2715 aaPredicted RBP14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 CBY3A6NI87 242 aa14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 F8W735 103 aaPredicted RBP14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 GPR183P32249 361 aa14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 AMN1Q8IY45 258 aa14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 IGLV11-55A0A075B6I3 123 aa14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 KLRD1Q13241 179 aa14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 FAM104BQ5XKR9 115 aa14.34□□□□□ -0.11
PCDHA1-202ENST00000394633 VPS13CQ709C8 3753 aa14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 CD5LO43866 347 aa14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 ZNF843Q8N446 348 aa14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 OR11H6Q8NGC7 330 aa14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 OR8A1Q8NGG7 326 aa14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 PRELID3AQ96N28 172 aa14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 IGKV2-40A0A087WW87 121 aaPredicted RBP14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 IGKV2D-40P01614 121 aaPredicted RBP14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 MFAP4P55083 255 aa14.33□□□□□ -0.12
PCDHA1-202ENST00000394633 FAM208BQ5VWN6 2430 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 CSMD2Q7Z408 3487 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 A0A1W2PPR1 153 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 A0A1W2PRD5 423 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 A0A1W2PRF3 423 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 A0A1W2PRM7 423 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 SNAI2O43623 268 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 C5orf64Q2M2E5 130 aa14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 ZNF48Q96MX3 618 aaPredicted RBP14.32□□□□□ -0.12
PCDHA1-202ENST00000394633 NPIPB5A8MRT5 1133 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 LY6HO94772 140 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 MRPL51Q4U2R6 128 aaKnown RBP14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 ANKRD39Q53RE8 183 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 S100A7AQ86SG5 101 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 FGF6P10767 208 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 PSG9Q00887 426 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 HES1Q14469 280 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 AMMECR1LQ6DCA0 310 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 ORMDL3Q8N138 153 aa14.31□□□□□ -0.12
PCDHA1-202ENST00000394633 NDPQ00604 133 aa14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 COX8CQ7Z4L0 72 aa14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 IGHV3-23P01764 117 aa14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 EGR2P11161 476 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 CDKN1BP46527 198 aa14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 FXYD7P58549 80 aa14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 DPF1Q92782 380 aa14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 PRR25Q96S07 402 aa14.3□□□□□ -0.12
PCDHA1-202ENST00000394633 ODF3BA8MYP8 253 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms