RNA–Protein interactions for RNA: ENST00000394576.2

PCDHGA2-201, Transcript of protocadherin gamma subfamily A, 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA2, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2-201ENST00000394576 ST6GALNAC6Q969X2 333 aa8.7□□□□□ -1.02
PCDHGA2-201ENST00000394576 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
PCDHGA2-201ENST00000394576 TMEM14BQ9NUH8 114 aa8.7□□□□□ -1.02
PCDHGA2-201ENST00000394576 IGHV4-61A0A0C4DH41 118 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 PRSS57Q6UWY2 283 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 SCRT1Q9BWW7 348 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 TMEM249Q2WGJ8 235 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 DUX4L9Q6RFH8 374 aaPredicted RBP8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 ZNF256Q9Y2P7 627 aaPredicted RBP8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 TNFRSF18Q9Y5U5 241 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 TNRC6BQ9UPQ9 1833 aaKnown RBP8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 OVOL1O14753 267 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 PFN1P07737 140 aaKnown RBP8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 PAX8Q06710 450 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 TMEM219Q86XT9 240 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 MRPL27Q9P0M9 148 aaKnown RBP8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 LEPP41159 167 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 POU2AF1Q16633 256 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 SMIM12Q96EX1 92 aa8.69□□□□□ -1.02
PCDHGA2-201ENST00000394576 ZNF462Q96JM2 2506 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 IGHV4-30-2A0A087WSY4 118 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 DUSP14O95147 198 aaKnown RBP8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 MS4A6AQ9H2W1 248 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 RNF114Q9Y508 228 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 H7C2G1 150 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 SRSF1Q07955 248 aaKnown RBP eCLIP8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 TMEM256Q8N2U0 113 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 LINC00469Q8N7U9 141 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 RNASE4P34096 147 aaKnown RBP8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 LOXL1Q08397 574 aaPredicted RBP8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 C15orf32Q32M92 178 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 ORMDL2Q53FV1 153 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 EXOC3-AS1Q8N2X6 119 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
PCDHGA2-201ENST00000394576 DYSFO75923 2080 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 CRXO43186 299 aaPredicted RBP8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 SNAI2O43623 268 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 LHFPL4Q7Z7J7 247 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 NUP35Q8NFH5 326 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 LYPD6BQ8NI32 183 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 FAM110DQ8TAY7 271 aaPredicted RBP8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 C19orf84I3L1E1 186 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 MSMPQ1L6U9 139 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 DMRTA1Q5VZB9 504 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 TOMM40O96008 361 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 C5orf30Q96GV9 206 aa8.67□□□□□ -1.02
PCDHGA2-201ENST00000394576 DPM2O94777 84 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 Q71RC1 249 aaPredicted RBP8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 SMPXQ9UHP9 88 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 FASNP49327 2511 aaKnown RBP8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 FRYQ5TBA9 3013 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 A0A1W2PPI3 338 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 IGLV2-14P01704 120 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 NDUFA4L2Q9NRX3 87 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 SORL1Q92673 2214 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 PDE6HQ13956 83 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 MLANAQ16655 118 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 SIGLEC15Q6ZMC9 328 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 ODF3L1Q8IXM7 274 aa8.66□□□□□ -1.02
PCDHGA2-201ENST00000394576 HOXB4P17483 251 aaPredicted RBP8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 C21orf62-AS1Q17RA5 79 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 SPRNQ5BIV9 151 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 C9orf139Q6ZV77 190 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 C11orf1Q9H5F2 150 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 TYMSP04818 313 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 CD7P09564 240 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 Q0VG73 95 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 CYSLTR1Q9Y271 337 aa8.65□□□□□ -1.02
PCDHGA2-201ENST00000394576 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 NDUFS6O75380 124 aaKnown RBP8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 MMP23AO75900 390 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 GZMBP10144 247 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 PSG3Q16557 428 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 ZNF329Q86UD4 541 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 TNRC6AQ8NDV7 1962 aaKnown RBP8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 ZNF138P52744 262 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 ZNF726P1Q15940 193 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 KLF17Q5JT82 389 aaPredicted RBP8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.03
PCDHGA2-201ENST00000394576 SETD2Q9BYW2 2564 aaPredicted RBP8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 H3BUA1 57 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 SEC11AP67812 179 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 HAPLN4Q86UW8 402 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 SPCS1Q9Y6A9 102 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 IGKV2-40A0A087WW87 121 aaPredicted RBP8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 C3orf79P0CE67 100 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 FBLN7Q53RD9 439 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 SHANK2-AS3Q9BTD1 123 aa8.64□□□□□ -1.03
PCDHGA2-201ENST00000394576 GFRA4Q9GZZ7 299 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms