RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 PLA2G2CQ5R387 149 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 ZNF747Q9BV97 191 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 MYO9AB2RTY4 2548 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 K7EQM0 130 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 GTSCR1Q86UQ5 136 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 VGLL1Q99990 258 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 AAMDCQ9H7C9 122 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 TRAV30A0A087WSZ9 112 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 NPYP01303 97 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 GATA4P43694 442 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 ECSCRQ19T08 205 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
SIPA1-201ENST00000394224 IGHV3OR16-10A0A075B7F0 116 aa13.21□□□□□ -0.29
SIPA1-201ENST00000394224 TMEM160Q9NX00 188 aa13.21□□□□□ -0.29
SIPA1-201ENST00000394224 E7EQL1 145 aa13.21□□□□□ -0.29
SIPA1-201ENST00000394224 THBDP07204 575 aa13.21□□□□□ -0.29
SIPA1-201ENST00000394224 MYCNOSP40205 109 aa13.21□□□□□ -0.29
SIPA1-201ENST00000394224 ATP5L2Q7Z4Y8 100 aa13.21□□□□□ -0.29
SIPA1-201ENST00000394224 ZNF414Q96IQ9 312 aa13.21□□□□□ -0.29
SIPA1-201ENST00000394224 ZNF785A8K8V0 405 aa13.21□□□□□ -0.3
SIPA1-201ENST00000394224 MC5RP33032 325 aa13.21□□□□□ -0.3
SIPA1-201ENST00000394224 DEFB1P60022 68 aa13.21□□□□□ -0.3
SIPA1-201ENST00000394224 KIR3DS1Q14943 382 aa13.21□□□□□ -0.3
SIPA1-201ENST00000394224 DEFB125Q8N687 156 aa13.21□□□□□ -0.3
SIPA1-201ENST00000394224 PRSS22Q9GZN4 317 aa13.21□□□□□ -0.3
SIPA1-201ENST00000394224 HRNRQ86YZ3 2850 aaPredicted RBP13.2□□□□□ -0.3
SIPA1-201ENST00000394224 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
SIPA1-201ENST00000394224 WFDC12Q8WWY7 111 aa13.2□□□□□ -0.3
SIPA1-201ENST00000394224 JMJD8Q96S16 334 aa13.2□□□□□ -0.3
SIPA1-201ENST00000394224 SCNM1Q9BWG6 230 aa13.2□□□□□ -0.3
SIPA1-201ENST00000394224 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
SIPA1-201ENST00000394224 CHCHD1Q96BP2 118 aaKnown RBP13.2□□□□□ -0.3
SIPA1-201ENST00000394224 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
SIPA1-201ENST00000394224 SH2D1AO60880 128 aa13.2□□□□□ -0.3
SIPA1-201ENST00000394224 CRYABP02511 175 aaKnown RBP13.2□□□□□ -0.3
SIPA1-201ENST00000394224 OTORQ9NRC9 128 aa13.2□□□□□ -0.3
SIPA1-201ENST00000394224 MRGPRG-AS1Q2M3A8 158 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 SAPCD1Q5SSQ6 148 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 THAP8Q8NA92 274 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 TRGV9Q99603 122 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 TRBV19A0A075B6N1 114 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 MRPL52Q86TS9 123 aaKnown RBP13.19□□□□□ -0.3
SIPA1-201ENST00000394224 HIF1ANQ9NWT6 349 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 ITGB1BP1O14713 200 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 LGALS7P47929 136 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
SIPA1-201ENST00000394224 PRO3102Q9H379 93 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 AGRNO00468 2067 aa13.19□□□□□ -0.3
SIPA1-201ENST00000394224 WNK1Q9H4A3 2382 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 BUB1B-PAK6H3BSN5 160 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 ZNF80P51504 273 aaPredicted RBP13.18□□□□□ -0.3
SIPA1-201ENST00000394224 C2orf91Q6ZV80 131 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 PEF1Q9UBV8 284 aaKnown RBP13.18□□□□□ -0.3
SIPA1-201ENST00000394224 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.18□□□□□ -0.3
SIPA1-201ENST00000394224 TEX36Q5VZQ5 186 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 NACAE9PAV3 2078 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
SIPA1-201ENST00000394224 MRPL51Q4U2R6 128 aaKnown RBP13.18□□□□□ -0.3
SIPA1-201ENST00000394224 PET117Q6UWS5 81 aa13.18□□□□□ -0.3
SIPA1-201ENST00000394224 NHP2Q9NX24 153 aaKnown RBP13.18□□□□□ -0.3
SIPA1-201ENST00000394224 SONP18583 2426 aaKnown RBP13.17□□□□□ -0.3
SIPA1-201ENST00000394224 A1L4Q6 167 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 LEPP41159 167 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 NDPQ00604 133 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 TMEM155Q4W5P6 130 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 A0A0G2JLM5 398 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 CDKN1BP46527 198 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
SIPA1-201ENST00000394224 AMTNQ6UX39 209 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 VSTM5A8MXK1 200 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 TGFAP01135 160 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 PSG3Q16557 428 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 ORMDL3Q8N138 153 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 ZNF491Q8N8L2 437 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 FOXC2Q99958 501 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 SPCS1Q9Y6A9 102 aa13.17□□□□□ -0.3
SIPA1-201ENST00000394224 NDFIP1Q9BT67 221 aa13.16□□□□□ -0.3
SIPA1-201ENST00000394224 USP9XQ93008 2570 aaPredicted RBP13.16□□□□□ -0.3
SIPA1-201ENST00000394224 SIGLEC15Q6ZMC9 328 aa13.16□□□□□ -0.3
SIPA1-201ENST00000394224 OR4A5Q8NH83 315 aa13.16□□□□□ -0.3
SIPA1-201ENST00000394224 HIVEP3Q5T1R4 2406 aa13.16□□□□□ -0.3
SIPA1-201ENST00000394224 IGKV2D-26A0A0A0MRZ7 120 aa13.15□□□□□ -0.3
SIPA1-201ENST00000394224 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
SIPA1-201ENST00000394224 NDUFA3O95167 84 aa13.15□□□□□ -0.3
SIPA1-201ENST00000394224 COX8AP10176 69 aa13.15□□□□□ -0.3
SIPA1-201ENST00000394224 K7EIM0 57 aa13.15□□□□□ -0.3
SIPA1-201ENST00000394224 K7ERU9 68 aa13.15□□□□□ -0.3
SIPA1-201ENST00000394224 OR1N2Q8NGR9 330 aa13.15□□□□□ -0.3
SIPA1-201ENST00000394224 NDUFS7O75251 213 aa13.14□□□□□ -0.31
SIPA1-201ENST00000394224 EMP1P54849 157 aa13.14□□□□□ -0.31
SIPA1-201ENST00000394224 FAM162BQ5T6X4 162 aa13.14□□□□□ -0.31
SIPA1-201ENST00000394224 HAX1O00165 279 aa13.14□□□□□ -0.31
SIPA1-201ENST00000394224 FAM57AQ8TBR7 257 aa13.14□□□□□ -0.31
SIPA1-201ENST00000394224 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms