RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CT45A10P0DMU9 189 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 PRR31Q5SQ13 230 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 GOLT1AQ6ZVE7 132 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 NEGR1Q7Z3B1 354 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 SRSF12Q8WXF0 261 aaKnown RBP7.04□□□□□ -1.28
GPNMB-202ENST00000381990 NPFFR1Q9GZQ6 430 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 CACNA1BQ00975 2339 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 TRAV8-1A0A0A6YYK1 113 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 IGHV1-3A0A0C4DH29 117 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 SLC25A17O43808 307 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 RPEQ96AT9 228 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 CHTOPQ9Y3Y2 248 aaKnown RBP7.04□□□□□ -1.28
GPNMB-202ENST00000381990 U3KQK5 164 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 ARHGAP32A7KAX9 2087 aa7.04□□□□□ -1.28
GPNMB-202ENST00000381990 IGHV3-72A0A0B4J1Y9 119 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 LY6LH3BQJ8 138 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 GOSR1O95249 250 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 PRB3Q04118 309 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-202ENST00000381990 KIR3DS1Q14943 382 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 OR11H6Q8NGC7 330 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 PIFOQ8TCI5 191 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 ZC2HC1AQ96GY0 325 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 SLC25A39Q9BZJ4 359 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-202ENST00000381990 TIMM8BQ9Y5J9 83 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-202ENST00000381990 A0A096LNJ9 63 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 H3BUT2 72 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 SAP30O75446 220 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 NCR2O95944 276 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 PRTN3P24158 256 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 RPL27AP46776 148 aaKnown RBP7.03□□□□□ -1.28
GPNMB-202ENST00000381990 SPTAN1Q13813 2472 aaKnown RBP7.03□□□□□ -1.28
GPNMB-202ENST00000381990 HCP5Q6MZN7 132 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 ADAMTSL5Q6ZMM2 481 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 C1orf122Q6ZSJ8 110 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 ORMDL3Q8N138 153 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 RITA1Q96K30 269 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 USP24Q9UPU5 2620 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 A0A1W2PPM0 123 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 CIDEAO60543 219 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 HBDP02042 147 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-202ENST00000381990 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 OR8A1Q8NGG7 326 aa7.03□□□□□ -1.28
GPNMB-202ENST00000381990 F11RQ9Y624 299 aaKnown RBP7.03□□□□□ -1.28
GPNMB-202ENST00000381990 NAV3Q8IVL0 2385 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 AKAP6Q13023 2319 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 TRBV19A0A075B6N1 114 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 SNAI2O43623 268 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 PSG3Q16557 428 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 EXOC3-AS1Q8N2X6 119 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 JMJD8Q96S16 334 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 TPSG1Q9NRR2 321 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 SIGLEC8Q9NYZ4 499 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 DPM3Q9P2X0 92 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 DOPEY1Q5JWR5 2465 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 SERTM2A0A1B0GWG4 89 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 H3BTX0 84 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 CRYGBP07316 175 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 FABP2P12104 132 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 LYZP61626 148 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 FAM104BQ5XKR9 115 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 RUSC1-AS1Q66K80 236 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 RNF5Q99942 180 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 RASL11BQ9BPW5 248 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 THYN1Q9P016 225 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 PSG8Q9UQ74 426 aa7.02□□□□□ -1.29
GPNMB-202ENST00000381990 ZNF785A8K8V0 405 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 ODF3BA8MYP8 253 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 D6R8Y8 96 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 CACNG7P62955 275 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 LINC01559Q495D7 138 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 PRELID3AQ96N28 172 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 SIGLEC9Q9Y336 463 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 SPCS1Q9Y6A9 102 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 PLXNB1O43157 2135 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 PAX8Q06710 450 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 IFI27L1Q96BM0 104 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 SRSF8Q9BRL6 282 aaKnown RBP7.01□□□□□ -1.29
GPNMB-202ENST00000381990 SHANK2-AS3Q9BTD1 123 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 HIGD1BQ9P298 99 aa7.01□□□□□ -1.29
GPNMB-202ENST00000381990 FBLL1A6NHQ2 334 aaKnown RBP7□□□□□ -1.29
GPNMB-202ENST00000381990 TIMM23O14925 209 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 ZFP36P26651 326 aaKnown RBP7□□□□□ -1.29
GPNMB-202ENST00000381990 CNTFRP26992 372 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 RIPPLY3P57055 190 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 KLRD1Q13241 179 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 FOXE3Q13461 319 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 PDE6HQ13956 83 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 PLGLAQ15195 96 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 SIGLEC15Q6ZMC9 328 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 LHFPL4Q7Z7J7 247 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 WNK2Q9Y3S1 2297 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 SCGB1A1P11684 91 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 COX8CQ7Z4L0 72 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 PPP1R27Q86WC6 154 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 IGFBPL1Q8WX77 278 aa7□□□□□ -1.29
GPNMB-202ENST00000381990 TMEM189A5PLL7 270 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 H3BRN7 92 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms