RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 C1QTNF4Q9BXJ3 329 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 PARD6GQ9BYG4 376 aaPredicted RBP6.72□□□□□ -1.33
HMGN1-202ENST00000380747 MFFQ9GZY8 342 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 ZNF331Q9NQX6 463 aaPredicted RBP6.72□□□□□ -1.33
HMGN1-202ENST00000380747 TMEM14CQ9P0S9 112 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 RFNGQ9Y644 331 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 KMT2AQ03164 3969 aa6.71□□□□□ -1.33
HMGN1-202ENST00000380747 DEFB4AO15263 64 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 JTBO76095 146 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 PYYP10082 97 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 HIST1H1EP10412 219 aaKnown RBP6.71□□□□□ -1.34
HMGN1-202ENST00000380747 CNN1P51911 297 aaKnown RBP6.71□□□□□ -1.34
HMGN1-202ENST00000380747 RHOBP62745 196 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 ZNF266Q14584 549 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 GUK1Q16774 197 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 HSD17B11Q8NBQ5 300 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 OR8A1Q8NGG7 326 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 BLNKQ8WV28 456 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 RPUSD4Q96CM3 377 aaKnown RBP6.71□□□□□ -1.34
HMGN1-202ENST00000380747 MRPL32Q9BYC8 188 aaKnown RBP6.71□□□□□ -1.34
HMGN1-202ENST00000380747 SLC35B3Q9H1N7 401 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 HRH4Q9H3N8 390 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 PPP1R14DQ9NXH3 145 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 FUT9Q9Y231 359 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 TIMM9Q9Y5J7 89 aa6.71□□□□□ -1.34
HMGN1-202ENST00000380747 IGHV3OR16-12A0A075B7B8 117 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 ZNF705FA8MVS1 300 aaPredicted RBP6.7□□□□□ -1.34
HMGN1-202ENST00000380747 SMLR1H3BR10 107 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 OR7C2O60412 319 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 PMS2P11Q13670 270 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 ACOT6Q3I5F7 207 aaPredicted RBP6.7□□□□□ -1.34
HMGN1-202ENST00000380747 CT83Q5H943 113 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 CSNK1G2-AS1Q8NCQ2 148 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 SAT2Q96F10 170 aaPredicted RBP6.7□□□□□ -1.34
HMGN1-202ENST00000380747 FAM167A-AS1Q96KT0 104 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 PAXXQ9BUH6 204 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 OR51M1Q9H341 326 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 TNFSF18Q9UNG2 199 aa6.7□□□□□ -1.34
HMGN1-202ENST00000380747 TRBV19A0A075B6N1 114 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 BORCS7-ASMTA0A0B4J1R7 106 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 IGHV4-28A0A0C4DH34 117 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 RNF222A6NCQ9 220 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 CXorf65A6NEN9 183 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 ZNF705EA8MWA4 302 aaPredicted RBP6.69□□□□□ -1.34
HMGN1-202ENST00000380747 G3V3Q6 166 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 ARPC5O15511 151 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 EIF3GO75821 320 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGN1-202ENST00000380747 OR10J4P0C629 311 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 MIFP14174 115 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 RAB2AP61019 212 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 SPINK13Q1W4C9 94 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 FAM122CQ6P4D5 195 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 AMTNQ6UX39 209 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 OR10J6PQ8NGY7 276 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 C11orf68Q9H3H3 251 aaKnown RBP6.69□□□□□ -1.34
HMGN1-202ENST00000380747 GOLT1BQ9Y3E0 138 aa6.69□□□□□ -1.34
HMGN1-202ENST00000380747 A0A1W2PPV4 95 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 A8MTW9 85 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 PRAC2D3DTV9 90 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 BOLA2-SMG1P6H3BVE0 249 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 M0R2Z0 102 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 ZNF253O75346 499 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 INSP01308 110 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 AMBPP02760 352 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 NBEAP1P0C6P0 100 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 M6PRP20645 277 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 ATP6V0CP27449 155 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 TAS2R45P59539 299 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 UBE2L3P68036 154 aaKnown RBP6.68□□□□□ -1.34
HMGN1-202ENST00000380747 KHDC3LQ587J8 217 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 RPL7L1Q6DKI1 246 aaKnown RBP6.68□□□□□ -1.34
HMGN1-202ENST00000380747 EXOC3-AS1Q8N2X6 119 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 Q8NAQ8 132 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 OR10G4Q8NGN3 311 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 OR10G9Q8NGN4 311 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 OR10G7Q8NGN6 311 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 C11orf45Q8TAV5 145 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 TMEM208Q9BTX3 173 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 SH3BGRL3Q9H299 93 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 AAMDCQ9H7C9 122 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 AGRNO00468 2067 aa6.68□□□□□ -1.34
HMGN1-202ENST00000380747 TRAV12-2A0A075B6T6 113 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 M0R3E3 92 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 NDUFB4O95168 129 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 RBMY1A1P0DJD3 496 aaKnown RBP6.67□□□□□ -1.34
HMGN1-202ENST00000380747 RBMY1CP0DJD4 496 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 NANOS2P60321 138 aaKnown RBP6.67□□□□□ -1.34
HMGN1-202ENST00000380747 PDE6HQ13956 83 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 ICAM4Q14773 271 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 RBMY1FQ15415 496 aaKnown RBP6.67□□□□□ -1.34
HMGN1-202ENST00000380747 ZNF705AQ6ZN79 300 aaPredicted RBP6.67□□□□□ -1.34
HMGN1-202ENST00000380747 BAP18Q8IXM2 172 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 C1orf158Q8N1D5 194 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 FXYD5Q96DB9 178 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 IGF2BP2-AS1Q96M15 143 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 PSMG3Q9BT73 122 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms