RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 MINOS1-NBL1R4GNA1 71 aa10.05□□□□□ -0.8
CHD3-203ENST00000380358 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
CHD3-203ENST00000380358 GAFA1Q96PS6 74 aa10.05□□□□□ -0.8
CHD3-203ENST00000380358 CSRP1P21291 193 aaKnown RBP10.05□□□□□ -0.8
CHD3-203ENST00000380358 TUBGCP6Q96RT7 1819 aa10.05□□□□□ -0.8
CHD3-203ENST00000380358 IGKV1-9A0A0C4DH69 117 aa10.05□□□□□ -0.8
CHD3-203ENST00000380358 CXCL1P09341 107 aa10.05□□□□□ -0.8
CHD3-203ENST00000380358 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 GLRX5Q86SX6 157 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 ETDCA0A1B0GVM5 59 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 RNF126Q9BV68 326 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 RREB1Q92766 1687 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.04□□□□□ -0.8
CHD3-203ENST00000380358 IGKV2-29A2NJV5 120 aaPredicted RBP10.04□□□□□ -0.8
CHD3-203ENST00000380358 ZNF883P0CG24 379 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 FAM120AOSQ5T036 256 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 A0A1B0GUS0 222 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 IGKV1-16P04430 117 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 NPBQ8NG41 125 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 PLSCR4Q9NRQ2 329 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 ZNF581Q9P0T4 197 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 NEUROG3Q9Y4Z2 214 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 ZGRF1Q86YA3 2104 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
CHD3-203ENST00000380358 A0A1B0GTI1 187 aa10.03□□□□□ -0.8
CHD3-203ENST00000380358 I3L3M4 83 aa10.03□□□□□ -0.8
CHD3-203ENST00000380358 RPRMLQ8N4K4 120 aa10.03□□□□□ -0.8
CHD3-203ENST00000380358 USF3Q68DE3 2245 aa10.03□□□□□ -0.8
CHD3-203ENST00000380358 NTF4P34130 210 aa10.03□□□□□ -0.8
CHD3-203ENST00000380358 AGMATQ9BSE5 352 aa10.03□□□□□ -0.8
CHD3-203ENST00000380358 LAMB2P55268 1798 aa10.03□□□□□ -0.8
CHD3-203ENST00000380358 MST1P26927 711 aa10.02□□□□□ -0.8
CHD3-203ENST00000380358 ANKRD39Q53RE8 183 aa10.02□□□□□ -0.8
CHD3-203ENST00000380358 TM2D2Q9BX73 214 aa10.02□□□□□ -0.8
CHD3-203ENST00000380358 LINC00473A8K010 186 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 FGF6P10767 208 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BKO60814 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BJP06899 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BOP23527 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BBP33778 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BDP58876 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BCP62807 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST2H2BEQ16778 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.02□□□□□ -0.81
CHD3-203ENST00000380358 HEPN1Q6WQI6 88 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BHQ93079 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BNQ99877 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 HIST1H2BMQ99879 126 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 NHSQ6T4R5 1651 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 A0A096LNI7 61 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 IGKV1-12A0A0C4DH73 117 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 RNF222A6NCQ9 220 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 K7EMI3 77 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 NDUFB8O95169 186 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 GTSF1Q8WW33 167 aa10.02□□□□□ -0.81
CHD3-203ENST00000380358 PIFOQ8TCI5 191 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 ZNF124Q15973 351 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 HEATR5AQ86XA9 2040 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 C5orf63A6NC05 138 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 SHISA9B4DS77 424 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 NRGNQ92686 78 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 A8MWP6 167 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 NCR3O14931 201 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 KIAA1551Q9HCM1 1747 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 GLI3P10071 1580 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 M0R1W7 72 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 CFHR4Q92496 578 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 TRGV9Q99603 122 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 PTPRFP10586 1907 aa10.01□□□□□ -0.81
CHD3-203ENST00000380358 F6UB75 175 aa10□□□□□ -0.81
CHD3-203ENST00000380358 CTSGP08311 255 aa10□□□□□ -0.81
CHD3-203ENST00000380358 IFITM2Q01629 132 aa10□□□□□ -0.81
CHD3-203ENST00000380358 IGLL5B9A064 214 aa10□□□□□ -0.81
CHD3-203ENST00000380358 WDR86Q86TI4 376 aa10□□□□□ -0.81
CHD3-203ENST00000380358 WIPF2Q8TF74 440 aaPredicted RBP10□□□□□ -0.81
CHD3-203ENST00000380358 WIPF3A6NGB9 483 aa10□□□□□ -0.81
CHD3-203ENST00000380358 FBLIM1Q8WUP2 373 aa10□□□□□ -0.81
CHD3-203ENST00000380358 IGKV1-27A0A075B6S5 117 aa10□□□□□ -0.81
CHD3-203ENST00000380358 CRYBA4P53673 196 aa10□□□□□ -0.81
CHD3-203ENST00000380358 IGLV3-21P80748 117 aaPredicted RBP10□□□□□ -0.81
CHD3-203ENST00000380358 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
CHD3-203ENST00000380358 TRAV9-1A0A075B6T8 112 aa10□□□□□ -0.81
CHD3-203ENST00000380358 IGHV1-69DA0A0B4J2H0 117 aa10□□□□□ -0.81
CHD3-203ENST00000380358 IGHV1-69P01742 117 aa10□□□□□ -0.81
CHD3-203ENST00000380358 SMPXQ9UHP9 88 aa10□□□□□ -0.81
CHD3-203ENST00000380358 ALS2Q96Q42 1657 aa10□□□□□ -0.81
CHD3-203ENST00000380358 H0Y9J4 135 aa10□□□□□ -0.81
CHD3-203ENST00000380358 IGHV1OR15-1A0A075B7D0 117 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 DUX4L9Q6RFH8 374 aaPredicted RBP9.99□□□□□ -0.81
CHD3-203ENST00000380358 C15orf53Q8NAA6 179 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 LOC285556D6RIA3 1793 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 IL18BPO95998 194 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 LMO1P25800 156 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 HS3ST6Q96QI5 342 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 A0A087WWC5 75 aa9.99□□□□□ -0.81
CHD3-203ENST00000380358 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms