RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
PRDM16-203ENST00000378391 C3orf56Q8N813 242 aa11.8□□□□□ -0.52
PRDM16-203ENST00000378391 IGKV2-40A0A087WW87 121 aaPredicted RBP11.79□□□□□ -0.52
PRDM16-203ENST00000378391 H0YJW9 148 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 IGKV2D-40P01614 121 aaPredicted RBP11.79□□□□□ -0.52
PRDM16-203ENST00000378391 LSM4Q9Y4Z0 139 aaKnown RBP11.79□□□□□ -0.52
PRDM16-203ENST00000378391 A0A1B0GUS0 222 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 LYNX1G3V0Z9 82 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 LILRA1O75019 489 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 LYNX1P0DP58 116 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
PRDM16-203ENST00000378391 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 IGHV1-3A0A0C4DH29 117 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 FAM240AA0A1B0GVK7 77 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 SIGLEC15Q6ZMC9 328 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 F5H768 121 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 B3GALT5-AS1P59052 145 aa11.79□□□□□ -0.52
PRDM16-203ENST00000378391 PI4KAP42356 2102 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 DNAH12Q6ZR08 3092 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 TRGV2A0A075B6R0 118 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 THBDP07204 575 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 DMRTC2Q8IXT2 367 aaPredicted RBP11.78□□□□□ -0.52
PRDM16-203ENST00000378391 CLPSL1A2RUU4 121 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 SIVA1O15304 175 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 TMEM178BH3BS89 294 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 RNASE2P10153 161 aaKnown RBP11.78□□□□□ -0.52
PRDM16-203ENST00000378391 CD28P10747 220 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 CDKN1AP38936 164 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 RIF1Q5UIP0 2472 aaKnown RBP11.78□□□□□ -0.52
PRDM16-203ENST00000378391 A0A1W2PPM0 123 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 PF4P02776 101 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 ZNF138P52744 262 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 UTRNP46939 3433 aa11.78□□□□□ -0.52
PRDM16-203ENST00000378391 PCNTO95613 3336 aa11.77□□□□□ -0.52
PRDM16-203ENST00000378391 A0A1W2PPI3 338 aa11.77□□□□□ -0.52
PRDM16-203ENST00000378391 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
PRDM16-203ENST00000378391 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
PRDM16-203ENST00000378391 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
PRDM16-203ENST00000378391 GFRA4Q9GZZ7 299 aa11.77□□□□□ -0.53
PRDM16-203ENST00000378391 CCL25O15444 150 aa11.77□□□□□ -0.53
PRDM16-203ENST00000378391 ATOX1O00244 68 aa11.77□□□□□ -0.53
PRDM16-203ENST00000378391 HAMPP81172 84 aa11.77□□□□□ -0.53
PRDM16-203ENST00000378391 PRADC1Q9BSG0 188 aa11.77□□□□□ -0.53
PRDM16-203ENST00000378391 IGKV1D-17A0A075B6S4 117 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 A4D1N5 150 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 Q0VFX4 171 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 ZNF672Q499Z4 452 aaPredicted RBP11.76□□□□□ -0.53
PRDM16-203ENST00000378391 SH2D1AO60880 128 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 MALP21145 153 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 RPL15P61313 204 aaKnown RBP11.76□□□□□ -0.53
PRDM16-203ENST00000378391 MINOS1Q5TGZ0 78 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 C9orf139Q6ZV77 190 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 PRSS22Q9GZN4 317 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 SIGLEC9Q9Y336 463 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 MINOS1-NBL1R4GNA1 71 aa11.76□□□□□ -0.53
PRDM16-203ENST00000378391 HAPLN4Q86UW8 402 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
PRDM16-203ENST00000378391 IGKV1-39P01597 117 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 IGKV1D-39P04432 117 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 LINC00205P59089 165 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 ZC2HC1BQ5TFG8 222 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 C5orf64Q2M2E5 130 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 PLEKHB2Q96CS7 222 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 GAFA1Q96PS6 74 aa11.75□□□□□ -0.53
PRDM16-203ENST00000378391 IGKV3D-20A0A0C4DH25 116 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 MDS2Q8NDY4 140 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 DPH3P1Q9H4G8 78 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 TMEM105Q8N8V8 129 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 CACNA1HO95180 2353 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 IGHG4P01861 327 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
PRDM16-203ENST00000378391 CD59P13987 128 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 TMEM86BQ8N661 226 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 OR11H6Q8NGC7 330 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 PKDREJQ9NTG1 2253 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 H3BMG7 143 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 HEATR1Q9H583 2144 aaKnown RBP11.73□□□□□ -0.53
PRDM16-203ENST00000378391 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 VCYO14598 125 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 IGLC2P0DOY2 106 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 PDE6HQ13956 83 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 C8orf86Q6ZUL3 223 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 Q86TA4 180 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 STHQ8IWL8 128 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 CADP27708 2225 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 PRSS29PA6NIE9 313 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 SAP30O75446 220 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 LMO1P25800 156 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 PTH2Q96A98 100 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 STPG4Q8N801 248 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 C18orf32Q8TCD1 76 aa11.73□□□□□ -0.53
PRDM16-203ENST00000378391 TCF15Q12870 199 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms