RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 TXNDC17Q9BRA2 123 aa9.7□□□□□ -0.86
CBWD3-203ENST00000377344 TREM1Q9NP99 234 aa9.7□□□□□ -0.86
CBWD3-203ENST00000377344 MED9Q9NWA0 146 aa9.7□□□□□ -0.86
CBWD3-203ENST00000377344 TRAV2A0A0B4J234 112 aa9.69□□□□□ -0.86
CBWD3-203ENST00000377344 PSG3Q16557 428 aa9.69□□□□□ -0.86
CBWD3-203ENST00000377344 OXLD1Q5BKU9 147 aa9.69□□□□□ -0.86
CBWD3-203ENST00000377344 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
CBWD3-203ENST00000377344 GPR61Q9BZJ8 451 aa9.69□□□□□ -0.86
CBWD3-203ENST00000377344 CLEC5AQ9NY25 188 aa9.69□□□□□ -0.86
CBWD3-203ENST00000377344 SCO2A0A1W2PP80 73 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 PDE6DO43924 150 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 EPDR1Q9UM22 224 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 PRELID1Q9Y255 219 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 ZNF256Q9Y2P7 627 aaPredicted RBP9.68□□□□□ -0.86
CBWD3-203ENST00000377344 F6UZH7 168 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 GOLT1AQ6ZVE7 132 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 SLC7A5P1Q8MH63 180 aa9.68□□□□□ -0.86
CBWD3-203ENST00000377344 RPUSD4Q96CM3 377 aaKnown RBP9.68□□□□□ -0.86
CBWD3-203ENST00000377344 DIRC3C9JPN6 131 aa9.67□□□□□ -0.86
CBWD3-203ENST00000377344 PEX7O00628 323 aa9.67□□□□□ -0.86
CBWD3-203ENST00000377344 TCRAP04437 139 aa9.67□□□□□ -0.86
CBWD3-203ENST00000377344 DEFB131AP59861 70 aa9.67□□□□□ -0.86
CBWD3-203ENST00000377344 DEFB1P60022 68 aa9.67□□□□□ -0.86
CBWD3-203ENST00000377344 CITED4Q96RK1 184 aa9.67□□□□□ -0.86
CBWD3-203ENST00000377344 IGKV2-40A0A087WW87 121 aaPredicted RBP9.66□□□□□ -0.86
CBWD3-203ENST00000377344 C9JQL5 133 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 PRAC2D3DTV9 90 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 IGKV2D-40P01614 121 aaPredicted RBP9.66□□□□□ -0.86
CBWD3-203ENST00000377344 NDUFA5Q16718 116 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 MRPL53Q96EL3 112 aaKnown RBP9.66□□□□□ -0.86
CBWD3-203ENST00000377344 TCEAL7Q9BRU2 100 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 ATG101Q9BSB4 218 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 MAP6D1Q9H9H5 199 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 OR11H12B2RN74 326 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 F6UB75 175 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 K7EQM0 130 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 WIPF1O43516 503 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 SRP19P09132 144 aaKnown RBP9.66□□□□□ -0.86
CBWD3-203ENST00000377344 CD7P09564 240 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 ZNF705DP0CH99 300 aaPredicted RBP9.66□□□□□ -0.86
CBWD3-203ENST00000377344 ZNF705BP0CI00 300 aaPredicted RBP9.66□□□□□ -0.86
CBWD3-203ENST00000377344 BEAN1Q3B7T3 259 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 UQCC3Q6UW78 93 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 GTSCR1Q86UQ5 136 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 CYB561D1Q8N8Q1 229 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 LINC00479Q96M42 142 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 SLC35B3Q9H1N7 401 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 SMDT1Q9H4I9 107 aa9.66□□□□□ -0.86
CBWD3-203ENST00000377344 TRAV34A0A0B4J273 112 aa9.65□□□□□ -0.86
CBWD3-203ENST00000377344 AKR1C3P42330 323 aa9.65□□□□□ -0.86
CBWD3-203ENST00000377344 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
CBWD3-203ENST00000377344 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.86
CBWD3-203ENST00000377344 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
CBWD3-203ENST00000377344 OR10J6PQ8NGY7 276 aa9.65□□□□□ -0.86
CBWD3-203ENST00000377344 NOTCH3Q9UM47 2321 aa9.65□□□□□ -0.87
CBWD3-203ENST00000377344 PKD1L1Q8TDX9 2849 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 G3V4G9 280 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 TMEM250H0YL14 139 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 CNN1P51911 297 aaKnown RBP9.64□□□□□ -0.87
CBWD3-203ENST00000377344 UBE2G1P62253 170 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 HIST1H1AQ02539 215 aaPredicted RBP9.64□□□□□ -0.87
CBWD3-203ENST00000377344 ZNF124Q15973 351 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 EBLN2Q6P2I7 272 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 EIF4E3Q8N5X7 224 aaKnown RBP9.64□□□□□ -0.87
CBWD3-203ENST00000377344 C11orf52Q96A22 123 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 DERL1Q9BUN8 251 aa9.64□□□□□ -0.87
CBWD3-203ENST00000377344 TRAV8-1A0A0A6YYK1 113 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 SFTA3P0C7M3 94 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 CMC4P56277 68 aaPredicted RBP9.63□□□□□ -0.87
CBWD3-203ENST00000377344 ERCC8Q13216 396 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 ACTL10Q5JWF8 245 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 VGLL1Q99990 258 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 SERTM2A0A1B0GWG4 89 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 RPL35P42766 123 aaKnown RBP9.63□□□□□ -0.87
CBWD3-203ENST00000377344 TMEM78Q5T7P6 136 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 FOXI2Q6ZQN5 318 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 C2CD4CQ8TF44 421 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 PARLQ9H300 379 aa9.63□□□□□ -0.87
CBWD3-203ENST00000377344 IGKV3-20P01619 116 aa9.62□□□□□ -0.87
CBWD3-203ENST00000377344 SOHLH1Q5JUK2 328 aa9.62□□□□□ -0.87
CBWD3-203ENST00000377344 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
CBWD3-203ENST00000377344 OR4B1Q8NGF8 309 aa9.62□□□□□ -0.87
CBWD3-203ENST00000377344 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
CBWD3-203ENST00000377344 PRR25Q96S07 402 aa9.62□□□□□ -0.87
CBWD3-203ENST00000377344 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
CBWD3-203ENST00000377344 SAV1Q9H4B6 383 aaPredicted RBP9.62□□□□□ -0.87
CBWD3-203ENST00000377344 A0A0J9YX75 114 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 RBAKDNA6NC62 111 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 TMEM75Q8N9X5 138 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 Q8TAT8 98 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 ASCL2Q99929 193 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 SMIM7Q9BQ49 75 aa9.61□□□□□ -0.87
CBWD3-203ENST00000377344 ZMAT5Q9UDW3 170 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms