RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SLC25A5P05141 298 aaKnown RBP17.13■□□□□ 0.33
HLA-C-202ENST00000376237 ZNF688P0C7X2 276 aa17.13■□□□□ 0.33
HLA-C-202ENST00000376237 PEA15Q15121 130 aa17.13■□□□□ 0.33
HLA-C-202ENST00000376237 RNF182Q8N6D2 247 aa17.13■□□□□ 0.33
HLA-C-202ENST00000376237 F6UZH7 168 aa17.12■□□□□ 0.33
HLA-C-202ENST00000376237 OXLD1Q5BKU9 147 aa17.12■□□□□ 0.33
HLA-C-202ENST00000376237 FAM24BQ8N5W8 94 aa17.12■□□□□ 0.33
HLA-C-202ENST00000376237 HIST1H2BAQ96A08 127 aa17.12■□□□□ 0.33
HLA-C-202ENST00000376237 FAM110AQ9BQ89 295 aa17.12■□□□□ 0.33
HLA-C-202ENST00000376237 EPDR1Q9UM22 224 aa17.12■□□□□ 0.33
HLA-C-202ENST00000376237 M0R3E3 92 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 HLA-DMBP28068 263 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 CD81P60033 236 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 PSMG4Q5JS54 123 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 TRRAPQ9Y4A5 3859 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 SERTM2A0A1B0GWG4 89 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 ZNF738Q8NE65 137 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 C20orf173Q96LM9 149 aa17.11■□□□□ 0.33
HLA-C-202ENST00000376237 DNHD1Q96M86 4753 aa17.1■□□□□ 0.33
HLA-C-202ENST00000376237 ANK2Q01484 3957 aa17.1■□□□□ 0.33
HLA-C-202ENST00000376237 RPUSD4Q96CM3 377 aaKnown RBP17.1■□□□□ 0.33
HLA-C-202ENST00000376237 NOTCH3Q9UM47 2321 aa17.09■□□□□ 0.33
HLA-C-202ENST00000376237 DEFB131AP59861 70 aa17.09■□□□□ 0.33
HLA-C-202ENST00000376237 GTSCR1Q86UQ5 136 aa17.09■□□□□ 0.33
HLA-C-202ENST00000376237 EIF4E3Q8N5X7 224 aaKnown RBP17.09■□□□□ 0.33
HLA-C-202ENST00000376237 ATG101Q9BSB4 218 aa17.09■□□□□ 0.33
HLA-C-202ENST00000376237 MAP6D1Q9H9H5 199 aa17.09■□□□□ 0.33
HLA-C-202ENST00000376237 ZNF705FA8MVS1 300 aaPredicted RBP17.08■□□□□ 0.32
HLA-C-202ENST00000376237 OR11H12B2RN74 326 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 DIRC3C9JPN6 131 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 TMEM250H0YL14 139 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 K7EQM0 130 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 TCRAP04437 139 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 EGFEM1PQ0D2K5 195 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 UQCC3Q6UW78 93 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 COMMD7Q86VX2 200 aa17.08■□□□□ 0.32
HLA-C-202ENST00000376237 PEX7O00628 323 aa17.07■□□□□ 0.32
HLA-C-202ENST00000376237 NDUFA5Q16718 116 aa17.07■□□□□ 0.32
HLA-C-202ENST00000376237 C11orf52Q96A22 123 aa17.07■□□□□ 0.32
HLA-C-202ENST00000376237 RBAKDNA6NC62 111 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 ODF3L2Q3SX64 289 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 SAMD5Q5TGI4 173 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 CYB561D1Q8N8Q1 229 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 CD7P09564 240 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 GNG5P63218 68 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 SRSF3P84103 164 aaKnown RBP17.06■□□□□ 0.32
HLA-C-202ENST00000376237 FOXI2Q6ZQN5 318 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 RPH3ALQ9UNE2 315 aa17.06■□□□□ 0.32
HLA-C-202ENST00000376237 SCO2A0A1W2PP80 73 aa17.05■□□□□ 0.32
HLA-C-202ENST00000376237 FBLL1A6NHQ2 334 aaKnown RBP17.05■□□□□ 0.32
HLA-C-202ENST00000376237 EBLN2Q6P2I7 272 aa17.05■□□□□ 0.32
HLA-C-202ENST00000376237 GOLT1AQ6ZVE7 132 aa17.05■□□□□ 0.32
HLA-C-202ENST00000376237 OR8A1Q8NGG7 326 aa17.05■□□□□ 0.32
HLA-C-202ENST00000376237 OR10J6PQ8NGY7 276 aa17.05■□□□□ 0.32
HLA-C-202ENST00000376237 TREM1Q9NP99 234 aa17.05■□□□□ 0.32
HLA-C-202ENST00000376237 PRAC2D3DTV9 90 aa17.04■□□□□ 0.32
HLA-C-202ENST00000376237 SRP19P09132 144 aaKnown RBP17.04■□□□□ 0.32
HLA-C-202ENST00000376237 SLC35B3Q9H1N7 401 aa17.04■□□□□ 0.32
HLA-C-202ENST00000376237 SAV1Q9H4B6 383 aaPredicted RBP17.04■□□□□ 0.32
HLA-C-202ENST00000376237 G3V4G9 280 aa17.03■□□□□ 0.32
HLA-C-202ENST00000376237 S100A9P06702 114 aaKnown RBP17.03■□□□□ 0.32
HLA-C-202ENST00000376237 C2CD4CQ8TF44 421 aa17.03■□□□□ 0.32
HLA-C-202ENST00000376237 C19orf73Q9NVV2 129 aa17.03■□□□□ 0.32
HLA-C-202ENST00000376237 A0A0J9YX75 114 aa17.02■□□□□ 0.32
HLA-C-202ENST00000376237 AKR1C3P42330 323 aa17.02■□□□□ 0.32
HLA-C-202ENST00000376237 CNN1P51911 297 aaKnown RBP17.02■□□□□ 0.32
HLA-C-202ENST00000376237 KLF12Q9Y4X4 402 aa17.02■□□□□ 0.32
HLA-C-202ENST00000376237 IGKV2-40A0A087WW87 121 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-202ENST00000376237 DUSP14O95147 198 aaKnown RBP17.01■□□□□ 0.31
HLA-C-202ENST00000376237 IGKV2D-40P01614 121 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-202ENST00000376237 C9orf47Q6ZRZ4 202 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 TMEM75Q8N9X5 138 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 LINC00477Q96M19 166 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 C9JQL5 133 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 F6UB75 175 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 UBE2G1P62253 170 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 HIST1H1AQ02539 215 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-202ENST00000376237 TMEM78Q5T7P6 136 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 APRG1Q8IVJ8 170 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 FMC1Q96HJ9 113 aa17.01■□□□□ 0.31
HLA-C-202ENST00000376237 NPIPB6E9PJ23 425 aa17■□□□□ 0.31
HLA-C-202ENST00000376237 HLA-DRB4P13762 266 aa17■□□□□ 0.31
HLA-C-202ENST00000376237 TMEM183BQ1AE95 376 aa17■□□□□ 0.31
HLA-C-202ENST00000376237 HLA-DRB4X5D2U9 266 aa17■□□□□ 0.31
HLA-C-202ENST00000376237 SORL1Q92673 2214 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 TAS2R60P59551 318 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 DEFB1P60022 68 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 KRTAP10-11P60412 298 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 ACTL10Q5JWF8 245 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 GDF5OSQ5U4N7 250 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 LINC00479Q96M42 142 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 VGLL1Q99990 258 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 AGPAT4-IT1Q9H0P7 198 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 PPP1R14DQ9NXH3 145 aa16.99■□□□□ 0.31
HLA-C-202ENST00000376237 TRBV6-1A0A0K0K1D8 114 aa16.98■□□□□ 0.31
HLA-C-202ENST00000376237 ZNF705DP0CH99 300 aaPredicted RBP16.98■□□□□ 0.31
HLA-C-202ENST00000376237 ZNF705BP0CI00 300 aaPredicted RBP16.98■□□□□ 0.31
HLA-C-202ENST00000376237 RPL35P42766 123 aaKnown RBP16.98■□□□□ 0.31
HLA-C-202ENST00000376237 CEBPGP53567 150 aa16.98■□□□□ 0.31
HLA-C-202ENST00000376237 FLI1Q01543 452 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms