RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 C5orf64Q2M2E5 130 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 TMEM249Q2WGJ8 235 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 UTF1Q5T230 341 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 KIR2DL5AQ8N109 375 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 MED12LQ86YW9 2145 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 HAX1O00165 279 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 FAM120AOSQ5T036 256 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 Q8NFD4 153 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 OR2K2Q8NGT1 345 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 ITLN2Q8WWU7 325 aaPredicted RBP5.23□□□□□ -1.57
SMC1A-202ENST00000375340 TRAV12-3A0A0B4J271 114 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 TMEM8BA6NDV4 472 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 PAX1P15863 534 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
SMC1A-202ENST00000375340 TNCP24821 2201 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 A0A087WWL8 130 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 TRAV41A0A0B4J266 112 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 IGLV1-44P01699 117 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 ADAMTSL5Q6ZMM2 481 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 VGLL1Q99990 258 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 WISP2O76076 250 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 GATA4P43694 442 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 PSMG4Q5JS54 123 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 SIGLEC8Q9NYZ4 499 aa5.23□□□□□ -1.57
SMC1A-202ENST00000375340 TRBV19A0A075B6N1 114 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 PPP1R17O96001 155 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 RRN3P1Q2M238 152 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 TTC32Q5I0X7 151 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 RAX2Q96IS3 184 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 TNFRSF18Q9Y5U5 241 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 RAI1Q7Z5J4 1906 aaPredicted RBP5.22□□□□□ -1.57
SMC1A-202ENST00000375340 PRR20EP86478 221 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 PRR20CP86479 221 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 PRR20DP86480 221 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 PRR20BP86481 221 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 PRR20AP86496 221 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 NEGR1Q7Z3B1 354 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 CENPVQ7Z7K6 275 aaPredicted RBP5.22□□□□□ -1.57
SMC1A-202ENST00000375340 MRAP2Q96G30 205 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 GTSF1LQ9H1H1 148 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 TNRC6AQ8NDV7 1962 aaKnown RBP5.22□□□□□ -1.57
SMC1A-202ENST00000375340 H3BRN7 92 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 OCIAD2Q56VL3 154 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 A0A1W2PNU3 283 aaPredicted RBP5.22□□□□□ -1.57
SMC1A-202ENST00000375340 LOXP28300 417 aaPredicted RBP5.22□□□□□ -1.57
SMC1A-202ENST00000375340 BVES-AS1Q5T3Y7 98 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 TNFRSF14Q92956 283 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 C11orf52Q96A22 123 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 CSTL1Q9H114 145 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 K7EMI3 77 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 CCL25O15444 150 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 SNCGO76070 127 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 THAP8Q8NA92 274 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 OR9G4Q8NGQ1 327 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 GAGE13Q4V321 117 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 C7orf69Q9H7B7 122 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 FAM215AQ9Y5M1 114 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 HLA-DMBP28068 263 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 TEX36Q5VZQ5 186 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 TP73-AS1Q9UF72 201 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 K7EM74 188 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 ITGB1BP1O14713 200 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 GAGE1Q13065 139 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 PRSS33Q8NF86 280 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 YPEL4Q96NS1 127 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 SIGMAR1Q99720 223 aa5.22□□□□□ -1.57
SMC1A-202ENST00000375340 CUL9Q8IWT3 2517 aa5.21□□□□□ -1.57
SMC1A-202ENST00000375340 TRAV21A0A0B4J279 112 aa5.21□□□□□ -1.57
SMC1A-202ENST00000375340 A0A1B0GV72 72 aa5.21□□□□□ -1.57
SMC1A-202ENST00000375340 NPIPB6E9PJ23 425 aa5.21□□□□□ -1.57
SMC1A-202ENST00000375340 NDUFB8O95169 186 aa5.21□□□□□ -1.57
SMC1A-202ENST00000375340 LINC01587Q99440 93 aa5.21□□□□□ -1.57
SMC1A-202ENST00000375340 SUMO2P61956 95 aaKnown RBP5.21□□□□□ -1.57
SMC1A-202ENST00000375340 TMEM155Q4W5P6 130 aa5.21□□□□□ -1.57
SMC1A-202ENST00000375340 PRSS46E5RG02 174 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 CD28P10747 220 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 DDB2Q92466 427 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 MED13LQ71F56 2210 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 C1orf122Q6ZSJ8 110 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 ATRXP46100 2492 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 DYSFO75923 2080 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 SPRY2O43597 315 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 NPYP01303 97 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 PPBPP02775 128 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 COX6CP09669 75 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 UCNP55089 124 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 KLF5Q13887 457 aaPredicted RBP5.21□□□□□ -1.58
SMC1A-202ENST00000375340 ORMDL2Q53FV1 153 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 TRAV8-2A0A0B4J237 113 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 PLXNB1O43157 2135 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 COX6B1P14854 86 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 LINC00477Q96M19 166 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 C11orf68Q9H3H3 251 aaKnown RBP5.21□□□□□ -1.58
SMC1A-202ENST00000375340 DKK2Q9UBU2 259 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 ATP6V0E1O15342 81 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 CD5LO43866 347 aa5.21□□□□□ -1.58
SMC1A-202ENST00000375340 CYSLTR1Q9Y271 337 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms